CATH Domain: 1m1nB04 XML data for domain: 1m1nB04

Molscript image for 1m1nB04
1m1nB04
PDB coordinates for domain 1m1nB04

PDB 1m1n, Chain B, Domain 4

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.89 Nitrogenase Molybdenum-iron Protein, subunit B; domain 4
1.20.89.10 Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 Gene3D
1.20.89.10.1
1.20.89.10.1.1
1.20.89.10.1.1.1
1.20.89.10.1.1.1.1
1.20.89.10.1.1.1.1.1

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Segment boundaries for domain 1m1nB04

Chopping figure for domain 1m1nB04
DomainStart PDB ResidueStop PDB Residue
1m1nB01 70 215
1m1nB02 216 320
1m1nB03 365 470
1m1nB04 321 364
1m1nB04 485 523

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.20.89.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2zinA01 75.67 Aminoacyl-tRNA biosynthesisMethanosarcina mazeiPyrrolysyl-tRNA synthetasePyrrolysyl-tRNA synthetase [EC:6.1.1.26] 1.10.287.540 48 10 53 2.35 4.43
2hepA00 72.36 Bacillus subtilisUPF0291 protein ynzC 1.10.287.540 42 7 40 1.68 4.10
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1m1nB04
GLDWTDEFLMKVSEISGQPIPASLTKERGRLVDMMTDSHTWLHGLGYEGAMQILTTLVNSILERLDEETRGMQATDYNHD
LVR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1m1nB04
GLDWTDEFLMKVSEISGQPIPASLTKERGRLVDMMTDSHTWLHGLGYEGAMQILTTLVNSILERLDEETRGMQATDYNHD
LVR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:11

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"