CATH Domain: 1lzjA00 XML data for domain: 1lzjA00

Molscript image for 1lzjA00
1lzjA00
PDB coordinates for domain 1lzjA00

PDB 1lzj, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.550 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A Gene3D
3.90.550.10.1
3.90.550.10.1.1
3.90.550.10.1.1.1
3.90.550.10.1.1.1.1
3.90.550.10.1.1.1.1.1

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Segment boundaries for domain 1lzjA00

Chopping figure for domain 1lzjA00
DomainStart PDB ResidueStop PDB Residue
1lzjA00 63 345

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.90.550.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ll3A00 74.30 Glycogenin-1Oryctolagus cuniculus 3.90.550.10 261 8 64 2.93 4.56
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1lzjA00
MVSLPRMVYPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVAFLKLFLETAEKHFM
VGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVGERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPSFYGSSRE
AFTYERRPQSQAYIPKDEGDFYYMGAFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHKPTKVLSPE
YLWDQQLLGWPAVLRKLRFTAVP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1lzjA00
MVSLPRMVYPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVAFLKLFLETAEKHFM
VGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVGAYKRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGV
EILTPLFGTLHPSFYGSSREAFTYERRPQSQAYIPKDEGDFYYMGAFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHD
ESHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRNP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:35

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:35

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:58

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"