CATH Domain: 1lyvA00 XML data for domain: 1lyvA00

Molscript image for 1lyvA00
1lyvA00
PDB coordinates for domain 1lyvA00

PDB 1lyv, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.190 Protein-Tyrosine Phosphatase; Chain A
3.90.190.10 Protein tyrosine phosphatase superfamily Gene3D
3.90.190.10.2
3.90.190.10.2.1
3.90.190.10.2.1.1
3.90.190.10.2.1.1.1
3.90.190.10.2.1.1.1.1

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Segment boundaries for domain 1lyvA00

Chopping figure for domain 1lyvA00
DomainStart PDB ResidueStop PDB Residue
1lyvA00 186 468

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.90.190.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1g4wR02 85.30 Salmonella enterica subsp. enterica serovar TyphimuriumSecreted effector protein sptPSecreted effector protein SptPProtein binding 3.90.190.10 221 27 74 2.62 3.51
2cjzA00 83.48 Protein dephosphorylationTyrosine-protein phosphatase non-receptor type 5Protein tyrosine phosphatase activityHomo sapiensPhosphotyrosine binding 3.90.190.10 275 16 84 3.81 4.49
2cm2A00 83.40 Insulin signaling pathwayAdherens junctionZinc ion bindingProtein tyrosine phosphatase activityProtein tyrosine phosphatase, non-receptor type 1 [EC:3.1.3.48] 3.90.190.10 283 13 89 3.71 4.17
2ooqA00 83.39 Cell surfaceDelta-catenin bindingPlasma membraneHomophilic cell adhesionReceptor-type tyrosine-protein phosphatase T 3.90.190.10 276 19 86 3.12 3.60
1p15B00 82.13 Mus musculusProtein phosphorylationReceptor-type tyrosine-protein phosphatase alphaInsulin receptor signaling pathway 3.90.190.10 246 21 80 3.59 4.44
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1lyvA00
VSPYGPEARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRRQTAVRADLNANYIQVGNTRTIACQYPLQS
QLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDYFRQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTIS
VPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIGAMCMNDSRNS
QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEGQGRPLLNS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1lyvA00
VSPYGPEARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRRQTAVRADLNANYIQVGNTRTIACQYPLQS
QLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDYFRQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTIS
VPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIGAMCMNDSRNS
QLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEGQGRPLLNS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:33

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:33

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:57

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"