CATH Domain: 1lucB00 XML data for domain: 1lucB00

Molscript image for 1lucB00
1lucB00
PDB coordinates for domain 1lucB00

PDB 1luc, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.30 FMN dependent fluorescent proteins Gene3D
3.20.20.30.1
3.20.20.30.1.1
3.20.20.30.1.1.1
3.20.20.30.1.1.1.1
3.20.20.30.1.1.1.1.1

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Segment boundaries for domain 1lucB00

Chopping figure for domain 1lucB00
DomainStart PDB ResidueStop PDB Residue
1lucB00 1 320

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.20.20.30.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lucA00 88.34 Vibrio harveyiAlkanal monooxygenase alpha chain 3.20.20.30 326 30 97 3.27 3.34
2i7gA00 83.77 Agrobacterium tumefaciens str. C58Monooxygenase 3.20.20.30 337 17 92 2.88 3.10
1rhcA00 81.67 Methanoculleus thermophilusF420-dependent alcohol dehydrogenase 3.20.20.30 330 15 92 2.97 3.22
2b81C00 80.82 Luciferase-like monooxygenaseLimonene and pinene degradationGamma-Hexachlorocyclohexane degradationNaphthalene and anthracene degradation[EC:1.14.-.-] 3.20.20.30 310 12 87 3.40 3.90
3c8nD00 79.81 Glucose-6-phosphate dehydrogenase, F420-dependentMycobacterium tuberculosis 3.20.20.30 320 10 91 3.08 3.35
1ezwA00 79.67 Methanopyrus kandleri5,10-methylenetetrahydromethanopterin reductaseCoenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11]Folate biosynthesisMetabolic pathways 3.20.20.30 347 10 87 3.32 3.81
1m41A00 79.60 Alkanesulfonate monooxygenase [EC:1.14.14.5]Alkanesulfonate monooxygenaseAlkanesulfonate catabolic processAlkanesulfonate monooxygenase activityEscherichia coli K-12 3.20.20.30 328 12 87 3.20 3.66
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1lucB00
MKFGLFFLNFMNSKRSSDQVIEEMLDTAHYVDQLKFDTLAVYENHFSNNGVVGAPLTVAGFLLGMTKNAKVASLNHVITT
HHPVRVAEEACLLDQMSEGRFAFGFSDCEKSADMRFFNRPTDSQFQLFSECHKIINDAFTTGYCHPNNDFYSFPKISVNP
HAFTEGGPAQFVNATSKEVVEWAAKLGLPLVFRWDDSNAQRKEYAGLYHEVAQAHGVDVSQVRHKLTLLVNQNVDGEAAR
AEARVYLEEFVRESYSNTDFEQKMGELLSENAIGTYEESTQAARVAIECCGAADLLMSFESMEDKAQQRAVIDVVNANIV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1lucB00
MKFGLFFLNFMNSKRSSDQVIEEMLDTAHYVDQLKFDTLAVYENHFSNNGVVGAPLTVAGFLLGMTKNAKVASLNHVITT
HHPVRVAEEACLLDQMSEGRFAFGFSDCEKSADMRFFNRPTDSQFQLFSECHKIINDAFTTGYCHPNNDFYSFPKISVNP
HAFTEGGPAQFVNATSKEVVEWAAKLGLPLVFRWDDSNAQRKEYAGLYHEVAQAHGVDVSQVRHKLTLLVNQNVDGEAAR
AEARVYLEEFVRESYSNTDFEQKMGELLSENAIGTYEESTQAARVAIECCGAADLLMSFESMEDKAQQRAVIDVVNANIV
KYHS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:18

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"