CATH Domain: 1lu4A00 XML data for domain: 1lu4A00

Molscript image for 1lu4A00
1lu4A00
PDB coordinates for domain 1lu4A00

PDB 1lu4, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.30 Glutaredoxin
3.40.30.10 Glutaredoxin Gene3D
3.40.30.10.8
3.40.30.10.8.1
3.40.30.10.8.1.1
3.40.30.10.8.1.1.1
3.40.30.10.8.1.1.1.1

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Segment boundaries for domain 1lu4A00

Chopping figure for domain 1lu4A00
DomainStart PDB ResidueStop PDB Residue
1lu4A00 1001 1134

Structural Neighbourhood (27 entries)

There are 27 matching structural neighberhood comparisons for CATH ID 3.40.30.10.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 27 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2f9sB00 89.56 Bacillus subtilisThiol-disulfide oxidoreductase resA 3.40.30.10 130 20 93 1.75 1.88
1kngA00 86.26 Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbEBradyrhizobium japonicumThiol:disulfide interchange protein cycY 3.40.30.10 144 21 89 2.06 2.30
3eytB00 85.00 Ruegeria pomeroyiPutative uncharacterized protein 3.40.30.10 147 21 86 2.53 2.93
3fw2A00 84.53 Bacteroides thetaiotaomicronPossible thiol-disulfide oxidoreductase 3.40.30.10 147 14 86 2.44 2.82
2e0qA00 83.67 Sulfolobus tokodaii140aa long hypothetical thioredoxinThioredoxin 1 3.40.30.10 104 24 73 3.06 4.14
1v98A00 81.95 Thermus thermophilus HB8Thioredoxin 2 [EC:1.8.1.8]Thioredoxin 3.40.30.10 92 20 64 2.39 3.68
2b7kA00 81.71 Protein SCO1, mitochondrialCopper ion bindingMitochondrial inner membraneSaccharomyces cerevisiaeCopper ion transport 3.40.30.10 155 13 84 3.15 3.73
1prxB01 81.60 Methane metabolismPhenylalanine metabolismMetabolic pathwaysPhospholipid catabolic processNucleus 3.40.30.10 148 13 80 2.28 2.84
3ewlB00 81.35 Bacteroides fragilis NCTC 9343Putative uncharacterized protein 3.40.30.10 131 14 91 3.22 3.54
2hyxA01 81.08 Mycobacterium tuberculosisProtein dipZ 3.40.30.10 201 19 65 2.15 3.30
1yexC00 80.96 Peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]Salmonella enterica subsp. enterica serovar TyphimuriumAlkyl hydroperoxide reductase subunit C 3.40.30.10 163 11 81 2.48 3.04
1o8xA00 80.87 TryparedoxinCrithidia fasciculata 3.40.30.10 143 13 87 3.61 4.13
2c0dA00 80.56 Peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]Thioredoxin peroxidase 2Plasmodium falciparum 3.40.30.10 168 20 79 2.44 3.08
1jfuA00 80.15 Bradyrhizobium japonicumThiol:disulfide interchange protein tlpA 3.40.30.10 176 17 74 2.33 3.13
2b5eA04 79.57 Endoplasmic reticulum lumenProtein disulfide oxidoreductase activityProtein disulfide isomerase activityProlyl 4-hydroxylase, beta polypeptide [EC:5.3.4.1]Saccharomyces cerevisiae 3.40.30.10 140 11 70 2.99 4.23
2bmxA00 79.41 Peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]Alkyl hydroperoxide reductase subunit CMycobacterium tuberculosis 3.40.30.10 168 15 77 2.74 3.51
3eurA00 79.21 Bacteroides fragilis NCTC 9343Putative uncharacterized protein 3.40.30.10 132 15 89 3.20 3.57
1hd2A00 78.66 PeroxisomePeroxiredoxin-5, mitochondrialPeroxiredoxin 5, atypical 2-Cys peroxiredoxin [EC:1.11.1.15]Cellular response to reactive oxygen speciesCytosolic part 3.40.30.10 161 9 80 2.83 3.50
1nm3A01 78.13 Peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]Haemophilus influenzaeHybrid peroxiredoxin hyPrx5 3.40.30.10 153 10 84 3.09 3.66
1xvqA00 78.08 Probable thiol peroxidaseThiol peroxidase, atypical 2-Cys peroxiredoxin [EC:1.11.1.15]Mycobacterium tuberculosis 3.40.30.10 159 17 79 3.32 4.19
2f8aB00 77.89 Heart contractionRegulation of gene expression, epigeneticGlutathione peroxidase 1SH3 domain bindingNegative regulation of caspase activity 3.40.30.10 175 11 70 2.58 3.67
2pn8H00 77.71 Peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]Thioredoxin peroxidase activityHomo sapiensI-kappaB phosphorylationPeroxiredoxin-4 3.40.30.10 189 14 69 2.40 3.46
2in3A01 76.97 Nitrosomonas europaeaPutative protein-disulfide isomerasePutative uncharacterized protein 3.40.30.10 78 15 53 2.32 4.32
2okaA00 74.69 Pseudomonas aeruginosaSelenoprotein W-related proteinPutative uncharacterized protein 3.40.30.10 84 8 54 2.62 4.81
2p0gB00 74.33 Vibrio choleraeSelenoprotein W-related proteinSelenoprotein W-related protein 3.40.30.10 79 8 53 2.62 4.88
2fa8B00 73.94 Agrobacterium tumefaciens str. C58Selenoprotein W-related proteinPutative uncharacterized protein 3.40.30.10 86 10 53 2.62 4.88
1h75A00 72.77 Glutaredoxin-like protein NrdHGlutaredoxin-like protein nrdHEscherichia coli K-12 3.40.30.10 76 10 53 2.58 4.80
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Displaying entries 1 to 27 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1lu4A00
ADERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLN
FTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAAL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1lu4A00
ADERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLN
FTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALTS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:10

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:10

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:33

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"