CATH Domain: 1lreA00 XML data for domain: 1lreA00

Molscript image for 1lreA00
1lreA00
PDB coordinates for domain 1lreA00

PDB 1lre, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.81 Receptor-associated Protein
1.20.81.10 Receptor-associated Protein Gene3D
1.20.81.10.1
1.20.81.10.1.1
1.20.81.10.1.1.1
1.20.81.10.1.1.1.1
1.20.81.10.1.1.1.1.1

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Segment boundaries for domain 1lreA00

Chopping figure for domain 1lreA00
DomainStart PDB ResidueStop PDB Residue
1lreA00 17 97

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.20.81.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cpyA02 82.21 Phytochelatin biosynthetic processProtein bindingFungal-type vacuole lumenSerine-type carboxypeptidase activityCarboxypeptidase Y 1.10.287.410 72 8 82 2.85 3.45
1bsmA01 75.71 Superoxide dismutase [Mn/Fe]Propionibacterium freudenreichii subsp. shermanii 1.10.287.990 64 4 60 3.00 4.96
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1lreA00
GEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKIQERDELAWKKLKLDGLDEDGEKEARLIRNLNVILAKYGLDGKKDA
R
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1lreA00
GEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKIQERDELAWKKLKLDGLDEDGEKEARLIRNLNVILAKYGLDGKKDA
R
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1lre000" to "1lreA00" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 18:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:40

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"