CATH Domain: 1lr5B00 XML data for domain: 1lr5B00

Molscript image for 1lr5B00
1lr5B00
PDB coordinates for domain 1lr5B00

PDB 1lr5, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.10 Jelly Rolls Gene3D
2.60.120.10.4
2.60.120.10.4.1
2.60.120.10.4.1.1
2.60.120.10.4.1.1.1
2.60.120.10.4.1.1.1.1

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Segment boundaries for domain 1lr5B00

Chopping figure for domain 1lr5B00
DomainStart PDB ResidueStop PDB Residue
1lr5B00 1 159

Structural Neighbourhood (13 entries)

There are 13 matching structural neighberhood comparisons for CATH ID 2.60.120.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 13 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1o4tA00 81.38 Thermotoga maritimaPutative uncharacterized protein 2.60.120.10 115 15 68 2.28 3.33
1vj2A00 81.13 Thermotoga maritimaPutative uncharacterized protein 2.60.120.10 114 19 69 2.14 3.07
2pfwA00 80.78 Cupin 2 domain-containing proteinShewanella frigidimarina NCIMB 400Cupin 2, conserved barrel domain protein 2.60.120.10 109 14 68 2.15 3.14
2gm6A02 80.04 Ralstonia eutropha JMP134Cysteine dioxygenase type I 2.60.120.10 137 11 83 3.77 4.51
3cjxA01 78.19 Ralstonia eutropha JMP134Putative uncharacterized protein 2.60.120.10 143 13 78 3.75 4.77
2o1qA01 77.71 2.60.120.10 124 7 74 3.36 4.49
1x82A00 77.63 Pyrococcus furiosusAmino sugar and nucleotide sugar metabolismGlucose-6-phosphate isomeraseGlucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]Metabolic pathways 2.60.120.10 185 15 68 3.35 4.92
1y9qA02 77.13 Vibrio choleraeTranscriptional regulator, HTH_3 family 2.60.120.10 90 16 53 2.15 4.02
2q30A01 77.09 Desulfovibrio desulfuricans subsp. desulfuricans str. G20Putative uncharacterized protein 2.60.120.10 85 27 52 1.77 3.39
2opkB01 76.59 Ralstonia eutropha JMP134Cupin 2 domain-containing proteinPutative uncharacterized protein 2.60.120.10 90 12 54 2.46 4.55
3bcwA01 74.97 Bordetella bronchisepticaPutative uncharacterized protein 2.60.120.10 93 6 55 2.59 4.68
1qwrA02 74.95 Amino sugar and nucleotide sugar metabolismBacillus subtilisMannose-6-phosphate isomerase [EC:5.3.1.8]Putative mannose-6-phosphate isomerase yvyIFructose and mannose metabolism 2.60.120.10 86 15 54 2.24 4.14
1zx5A02 73.99 Amino sugar and nucleotide sugar metabolismMannose-6-phosphate isomerase [EC:5.3.1.8]Archaeoglobus fulgidusMannosephosphate isomerase, putativeFructose and mannose metabolism 2.60.120.10 80 10 49 2.09 4.21
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Displaying entries 1 to 13 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1lr5B00
SCVRDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSS
LKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEAA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1lr5B00
SCVRDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSS
LKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEAAK
EQL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:02

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"