CATH Domain: 1lqtA02 XML data for domain: 1lqtA02

Molscript image for 1lqtA02
1lqtA02
PDB coordinates for domain 1lqtA02

PDB 1lqt, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.50 3-Layer(bba) Sandwich
3.50.50 FAD/NAD(P)-binding domain
3.50.50.60 Gene3D
3.50.50.60.2
3.50.50.60.2.1
3.50.50.60.2.1.1
3.50.50.60.2.1.1.1
3.50.50.60.2.1.1.1.1

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Segment boundaries for domain 1lqtA02

Chopping figure for domain 1lqtA02
DomainStart PDB ResidueStop PDB Residue
1lqtA01 3 46
1lqtA01 63 108
1lqtA01 325 454
1lqtA02 47 62
1lqtA02 109 324

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.50.50.60.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gteA04 79.62 Pyrimidine metabolismSus scrofaProtein homodimerization activityDihydropyrimidine dehydrogenase [NADP+]Dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2] 3.50.50.60 153 20 62 3.09 4.94
1fl2A02 77.21 Alkyl hydroperoxide reductase subunit F [EC:1.6.4.-]Alkyl hydroperoxide reductase subunit FProtein bindingEscherichia coli K-12Cytosol 3.50.50.60 124 21 52 2.29 4.37
3f8dA02 76.96 NADH oxidase/thioredoxin reductaseSulfolobus solfataricus 3.50.50.60 123 27 52 2.42 4.62
2zbwA02 75.92 Pyrimidine metabolismThermus thermophilus HB8Thioredoxin reductase (NADPH) [EC:1.8.1.9]Ferredoxin--NADP reductase 3.50.50.60 122 21 51 2.56 4.92
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1lqtA02
GLVRSGVAPDHPKIKSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDV
LARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVL
RGYADRERPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1lqtA02
GLVRSGVAPDHPKIKSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDV
LARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVL
RGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:10

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"