CATH Domain: 1lqtA01 XML data for domain: 1lqtA01

Molscript image for 1lqtA01
1lqtA01
PDB coordinates for domain 1lqtA01

PDB 1lqt, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.720 NAD(P)-binding Rossmann-like Domain Gene3D
3.40.50.720.4
3.40.50.720.4.1
3.40.50.720.4.1.1
3.40.50.720.4.1.1.1
3.40.50.720.4.1.1.1.1

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Segment boundaries for domain 1lqtA01

Chopping figure for domain 1lqtA01
DomainStart PDB ResidueStop PDB Residue
1lqtA01 3 46
1lqtA01 63 108
1lqtA01 325 454
1lqtA02 47 62
1lqtA02 109 324

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.50.720.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cjcA01 91.94 Flavin adenine dinucleotide bindingBos taurusSteroid biosynthetic processFerredoxin-NADP+ reductase activityNADP or NADPH binding 3.40.50.720 214 34 96 1.74 1.80
1fl2A01 80.52 Alkyl hydroperoxide reductase subunit F [EC:1.6.4.-]Alkyl hydroperoxide reductase subunit FProtein bindingEscherichia coli K-12Cytosol 3.50.50.60 186 11 66 2.44 3.69
1mo9A01 78.31 2-oxopropyl-CoM reductase, carboxylatingXanthobacter autotrophicus Py2 3.50.50.60 204 11 64 2.97 4.58
3g3eA01 76.44 PeroxisomeArginine and proline metabolismD-amino-acid oxidase [EC:1.4.3.3]Glycine, serine and threonine metabolismD-amino-acid oxidase activity 3.40.50.720 199 7 64 2.75 4.28
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1lqtA01
PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYD
AVIYAVGAQSRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAE
CKSFDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1lqtA01
PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYD
AVIYAVGAQSRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAE
CKSFPEDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:10

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"