CATH Domain: 1lo7A00 XML data for domain: 1lo7A00

Molscript image for 1lo7A00
1lo7A00
PDB coordinates for domain 1lo7A00

PDB 1lo7, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.129 Thiol Ester Dehydrase; Chain A
3.10.129.10 Gene3D
3.10.129.10.2
3.10.129.10.2.1
3.10.129.10.2.1.1
3.10.129.10.2.1.1.1
3.10.129.10.2.1.1.1.1

Segment boundaries for domain 1lo7A00

Chopping figure for domain 1lo7A00
DomainStart PDB ResidueStop PDB Residue
1lo7A00 2 141

Structural Neighbourhood (35 entries)

There are 35 matching structural neighberhood comparisons for CATH ID 3.10.129.10.2.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 35 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1s5uE00 89.78 Protein bindingEscherichia coli K-12Acyl-CoA thioester hydrolase ybgC 3.10.129.10 136 15 93 1.83 1.96
3ck1A00 88.87 Ubiquinone and other terpenoid-quinone biosynthesisRalstonia eutropha JMP1344-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]2,4-Dichlorobenzoate degradationMetabolic pathways 3.10.129.10 138 18 92 1.69 1.82
2oafA00 88.10 Jannaschia sp. CCS1Thioesterase superfamily 3.10.129.10 135 19 90 2.13 2.37
1njkA00 87.88 Long-chain acyl-CoA thioesterase tesCAcyl-CoA thioesterase activityThioesterase III [EC:3.1.2.-]Fatty acid beta-oxidationEscherichia coli K-12 3.10.129.10 130 16 90 2.23 2.46
2oiwA00 86.82 Geobacillus kaustophilusHypothetical conserved protein 3.10.129.10 129 13 87 2.60 2.96
2o5uC00 86.37 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 140 12 92 2.23 2.40
2hx5A00 86.30 Ubiquinone and other terpenoid-quinone biosynthesis1,4-dihydroxy-2-naphthoyl-CoA hydrolase1,4-dihydroxy-2-naphthoyl-CoA thioesterase [EC:3.1.2.-]Prochlorococcus marinus str. MIT 9313Metabolic pathways 3.10.129.10 141 17 92 2.69 2.90
2aliA00 86.08 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 126 15 90 2.18 2.42
2nujA01 85.62 Jannaschia sp. CCS1Thioesterase superfamily 3.10.129.10 145 13 87 2.51 2.87
2hljA01 85.47 Pseudomonas putida KT2440Putative uncharacterized protein 3.10.129.10 132 11 89 2.94 3.29
2essA01 85.28 Bacteroides thetaiotaomicronAcyl-ACP thioesterase 3.10.129.10 138 10 89 2.48 2.78
3bjkD00 84.71 Acyl-CoA thioesterase YciA [EC:3.1.2.-]Haemophilus influenzaeBiosynthesis of unsaturated fatty acidsUncharacterized acyl-CoA thioester hydrolase HI_0827 3.10.129.10 139 12 88 2.88 3.25
2q2bA00 84.22 Mus musculusCytosolic acyl coenzyme A thioester hydrolaseFatty acid catabolic processPalmitoyl-CoA hydrolase activity 3.10.129.10 141 10 82 3.19 3.84
1wluA00 83.15 Thermus thermophilus HB8Phenylacetic acid degradation protein PaaIPhenylacetic acid degradation protein 3.10.129.10 117 9 71 2.37 3.32
1vpmB00 82.90 Acyl-CoA hydrolaseBacillus halodurans 3.10.129.10 148 11 79 3.03 3.83
1ixlA00 82.61 Putative uncharacterized protein PH1136Pyrococcus horikoshii 3.10.129.10 127 11 74 2.73 3.67
1q4uB00 82.48 Arthrobacter sp. SUFcbC1 3.10.129.10 139 7 77 2.66 3.45
3b7kB01 82.10 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 140 16 81 3.29 4.04
1zkiA00 81.60 Pseudomonas aeruginosaPhenylacetic acid degradation proteinPutative uncharacterized protein 3.10.129.10 118 8 69 2.32 3.35
2ov9A01 81.48 Rhodococcus jostii RHA1Putative uncharacterized protein 3.10.129.10 142 8 69 2.34 3.36
2pimA00 81.39 Ralstonia eutropha JMP134Phenylacetic acid degradation-related protein 3.10.129.10 127 14 70 2.31 3.30
2essA02 81.11 Bacteroides thetaiotaomicronAcyl-ACP thioesterase 3.10.129.10 94 14 65 3.02 4.65
1iq6B00 80.95 Aeromonas punctataAeromonas caviae phaC PHA synthase,complete cds 3.10.129.10 133 9 70 2.06 2.91
2hboA01 80.64 Caulobacter vibrioidesPutative uncharacterized protein 3.10.129.10 126 8 70 3.48 4.97
3b7kA02 80.46 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 121 5 83 3.63 4.34
1yocA00 80.37 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 145 6 71 3.23 4.50
2prxA00 80.31 Shewanella loihica PV-4Thioesterase superfamily protein 3.10.129.10 108 12 65 2.56 3.90
1t82A00 80.07 Shewanella oneidensisPutative uncharacterized protein 3.10.129.10 138 2 72 3.14 4.31
2qwzA01 79.79 Phenylacetic acid degradation-related proteinRuegeria sp. TM1040 3.10.129.10 128 10 72 3.01 4.13
1tbuB00 79.62 Palmitoyl-CoA hydrolase [EC:3.1.2.2]Protein bindingBiosynthesis of unsaturated fatty acidsPeroxisomal acyl-coenzyme A thioester hydrolase 1Peroxisome 3.10.129.10 98 8 65 3.00 4.62
3b7kC02 79.60 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 110 5 77 3.12 4.04
1q6wG00 79.47 Monoamine oxidase regulatory protein, putativeArchaeoglobus fulgidus 3.10.129.10 147 7 72 2.57 3.56
1z6bC00 79.23 Fatty acid biosynthesisMetabolic pathways3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]Plasmodium falciparumBeta-hydroxyacyl-ACP dehydratase 3.10.129.10 138 7 72 3.46 4.75
1c8uA01 78.20 Biosynthesis of unsaturated fatty acidsAcyl-CoA thioesterase II [EC:3.1.2.-]Acyl-CoA thioesterase 2Acyl-CoA thioesterase activityFatty acid catabolic process 3.10.129.10 156 7 71 3.37 4.69
1pn2D02 77.29 Candida tropicalisPeroxisomal hydratase-dehydrogenase-epimerase 3.10.129.10 122 7 65 2.49 3.83
Displaying entries 1 to 35 (page 1 of 1)


Domain ATOM Sequence

>pdb|1lo7A00
ARSITMQQRIEFGDCDPAGIVWYPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTIE
TCIKEWRRKSFVQRHSVSRTTPGGDVQLVMRADEIRVFAMNDGERLRAIEVPADYIELCS    

Domain COMBS Sequence

>pdb|1lo7A00
MARSITMQQRIEFGDCDPAGIVWYPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTI
ETCIKEWRRKSFVQRHSVSRTTPGGDVQLVMRADEIRVFAMNDGERLRAIEVPADYIELCS    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"