CATH Domain: 1lfkA00 XML data for domain: 1lfkA00

Molscript image for 1lfkA00
1lfkA00
PDB coordinates for domain 1lfkA00

PDB 1lfk, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.630 Cytochrome p450
1.10.630.10 Cytochrome p450 Gene3D
1.10.630.10.12
1.10.630.10.12.1
1.10.630.10.12.1.1
1.10.630.10.12.1.1.1
1.10.630.10.12.1.1.1.1

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Segment boundaries for domain 1lfkA00

Chopping figure for domain 1lfkA00
DomainStart PDB ResidueStop PDB Residue
1lfkA00 5 398

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 1.10.630.10.12.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cptA00 84.07 Pseudomonas sp.Cytochrome P450-terp 1.10.630.10 412 24 89 2.89 3.22
2z3tA00 83.90 Cytochrome P450Streptomyces sp. TP-A0274 1.10.630.10 385 26 93 3.62 3.87
1q5dA00 83.72 Epothilone biosynthetic processCytochrome P450 167A1Sorangium cellulosum 1.10.630.10 401 23 90 3.12 3.45
1n97A00 81.51 Thermus thermophilus HB27Cytochrome P450 1.10.630.10 385 15 85 3.08 3.58
1izoA00 78.82 Bacillus subtilisLimonene and pinene degradationNaphthalene and anthracene degradationGamma-Hexachlorocyclohexane degradationCytochrome P450 152A1 1.10.630.10 411 16 89 4.12 4.61
3czhA00 76.68 Vitamin D 25-hydroxylaseHomo sapiensCytochrome P450, family 2, subfamily R 1.10.630.10 465 15 78 3.74 4.76
1tqnA00 76.50 Vitamin D 24-hydroxylase activityCell surfaceSteroid bindingSteroid hormone biosynthesisMetabolic pathways 1.10.630.10 468 15 76 3.57 4.69
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1lfkA00
DPRPLHIRRQGLDPADELLAAGALTRVTAETHWMATAHAVVRQVMGDHQQFSTRRRWDPELVGNLMDYDPPEHTRLRRKL
TPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCELVGVPRDDRDMFMKLCHGHLDASLSQKRR
AALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFR
GDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREPIPHVAFGHG
VHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVAW
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1lfkA00
MSEDDPRPLHIRRQGLDPADELLAAGALTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFR
PRELVGNLMDYDPPEHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCELVGVPR
DDRDMFMKLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDN
ISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPA
LAPDVDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVAW
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:14

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:14

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:36

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"