CATH Domain: 1l8bB00 XML data for domain: 1l8bB00

Molscript image for 1l8bB00
1l8bB00
PDB coordinates for domain 1l8bB00

PDB 1l8b, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.760 RNA Cap, Translation Initiation Factor Eif4e
3.30.760.10 RNA Cap, Translation Initiation Factor Eif4e Gene3D
3.30.760.10.1
3.30.760.10.1.1
3.30.760.10.1.1.1
3.30.760.10.1.1.1.1
3.30.760.10.1.1.1.1.1

[top]
Segment boundaries for domain 1l8bB00

Chopping figure for domain 1l8bB00
DomainStart PDB ResidueStop PDB Residue
1l8bB00 28 217

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.30.760.10.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ztpA01 77.35 UPF0696 protein C11orf68Homo sapiens 3.30.760.10 210 10 66 2.95 4.42
[1]
Displaying entries 1 to 1 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1l8bB00
VANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKN
KRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERL
GLPPKIVIGYQSHADTATKSGSTTKNRFVV
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1l8bB00
VANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKN
KRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERL
GLPPKIVIGYQSHADTATKSGSTTKNRFVV
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:31

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"