CATH Domain: 1l6rA01 XML data for domain: 1l6rA01

Molscript image for 1l6rA01
1l6rA01
PDB coordinates for domain 1l6rA01

PDB 1l6r, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1000 Gene3D
3.40.50.1000.3
3.40.50.1000.3.1
3.40.50.1000.3.1.1
3.40.50.1000.3.1.1.1
3.40.50.1000.3.1.1.1.1

Segment boundaries for domain 1l6rA01

Chopping figure for domain 1l6rA01
DomainStart PDB ResidueStop PDB Residue
1l6rA01 2 80
1l6rA01 146 223
1l6rA02 81 144

Structural Neighbourhood (49 entries)

There are 49 matching structural neighberhood comparisons for CATH ID 3.40.50.1000.3.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 49 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wr8A01 90.76 Pyrococcus horikoshiiPhosphoglycolate phosphatase 3.40.50.1000 161 29 95 1.61 1.69
1nf2A01 87.07 Thermotoga maritimaPutative uncharacterized protein 3.40.50.1000 161 22 95 2.15 2.26
1k1eD00 86.07 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]Haemophilus influenzaeLipopolysaccharide biosynthesisMetabolic pathways 3.40.50.1000 170 20 80 1.90 2.36
1rlmA01 85.55 Sugar phosphatase supHSugar-phosphatase [EC:3.1.3.23]Escherichia coli K-12 3.40.50.1000 162 18 93 2.51 2.68
1wpgA04 84.65 Calcium ion bindingATP catabolic processER-Golgi intermediate compartmentCalcium-transporting ATPase activitySarcoplasmic/endoplasmic reticulum calcium ATPase 1 3.40.50.1000 156 17 79 3.09 3.89
1s2oA01 83.74 Synechocystis sp. PCC 6803Slr0953 protein 3.40.50.1000 173 16 87 3.14 3.60
2hszA01 83.11 Phosphoglycolate phosphatase [EC:3.1.3.18]Haemophilus somnus 129PTMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase 3.40.50.1000 148 12 86 2.83 3.27
1nnlA01 82.68 Phosphoserine phosphatase [EC:3.1.3.3]Phosphoserine phosphataseGlycine, serine and threonine metabolismHomo sapiensPhosphoserine phosphatase activity 3.40.50.1000 154 14 87 3.40 3.88
2ah5A01 82.32 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysPhosphoglycolate phosphatase [EC:3.1.3.18]Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 142 11 83 2.87 3.45
1u02A01 82.12 Trehalose-6-phosphate phosphatase related proteinThermoplasma acidophilum 3.40.50.1000 149 14 89 3.07 3.45
2nyvA01 81.50 Phosphoglycolate phosphatase [EC:3.1.3.18]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysAquifex aeolicusPhosphoglycolate phosphatase 3.40.50.1000 151 13 89 3.17 3.56
3d6jA01 81.42 Phosphoglycolate phosphatase [EC:3.1.3.18]Putative haloacid dehalogenase-like hydrolaseBacteroides fragilis NCTC 9343Glyoxylate and dicarboxylate metabolismMetabolic pathways 3.40.50.1000 137 13 83 2.76 3.29
1xviB01 81.26 Fructose and mannose metabolismMannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]Putative mannosyl-3-phosphoglycerate phosphataseProtein bindingEscherichia coli K-12 3.40.50.1000 135 18 75 2.58 3.42
3b8cA03 81.21 Oxidative phosphorylationArabidopsis thalianaPlasma membraneATPase 2, plasma membrane-typeProtein binding 3.40.50.1000 163 20 80 2.48 3.06
3gygC01 81.01 Bacillus subtilisNTD biosynthesis operon putative hydrolase ntdB 3.40.50.1000 191 18 79 3.71 4.69
3dnpA01 80.92 Stress response protein yhaXBacillus subtilis 3.40.50.1000 144 18 90 3.29 3.64
1te2A01 80.90 Fructose and mannose metabolismMetabolic pathwaysRiboflavin metabolismThiamine metabolismMetal ion binding 3.40.50.1000 141 12 85 2.99 3.48
2b0cA01 80.70 Phosphatase yihXGlucose-1-phosphatase activityPutative hydrolase of the HAD superfamilyEscherichia coli K-12 3.40.50.1000 133 11 80 3.10 3.88
3e58B01 80.58 Streptococcus thermophilus LMG 18311Beta-phosphoglucomutase, putative 3.40.50.1000 136 13 82 2.98 3.61
2hi0A01 80.57 Putative phosphoglycolate phosphatasePhosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842Metabolic pathwaysGlyoxylate and dicarboxylate metabolism 3.40.50.1000 146 14 85 2.97 3.46
3i28A01 80.48 PeroxisomeSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase activityEpoxide hydrolase 2 3.40.50.1000 135 14 78 2.99 3.80
2fi1A01 80.30 Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 123 15 73 2.57 3.49
2hcfA01 80.12 Chlorobaculum tepidumHydrolase, haloacid dehalogenase-like family 3.40.50.1000 156 12 87 3.34 3.80
1swvA01 79.82 Bacillus cereusPhosphonoacetaldehyde hydrolase 3.40.50.1000 178 8 76 3.07 3.99
2ho4B01 79.61 Mus musculusHaloacid dehalogenase-like hydrolase domain-containing protein 2 3.40.50.1000 159 10 85 3.57 4.17
2fdrA01 79.57 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.1000 150 8 85 3.21 3.74
3ed5A01 79.33 Putative HAD-hydrolase yfnBBacillus subtilis2-haloacid dehalogenase [EC:3.8.1.2]1,2-Dichloroethane degradationGamma-Hexachlorocyclohexane degradation 3.40.50.1000 140 10 84 3.05 3.61
2pr7A00 79.22 Corynebacterium glutamicumHaloacid dehalogenase/epoxide hydrolase family 3.40.50.1000 131 13 77 3.14 4.06
1cqzA01 79.10 PeroxisomeMus musculusSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase 2 3.40.50.1000 162 12 77 2.97 3.85
1u7pD00 79.09 Mus musculusMagnesium-dependent phosphatase 1 3.40.50.1000 161 10 74 2.94 3.94
1qq5A01 79.06 (S)-2-haloacid dehalogenaseXanthobacter autotrophicus 3.40.50.1000 166 13 78 3.12 3.95
2pkeA01 78.84 Xanthomonas campestris pv. campestrisPutative hydrolase of the HAD superfamilyHydrolase, haloacid delahogenase-like family 3.40.50.1000 152 9 81 3.48 4.25
3dv9A01 78.79 Bacteroides vulgatus ATCC 8482Putative beta-phosphoglucomutase 3.40.50.1000 160 9 80 2.91 3.64
2hx1A01 78.48 Cytophaga hutchinsonii ATCC 33406Possible sugar phosphatase, HAD superfamily 3.40.50.1000 155 8 78 3.40 4.36
2wf7A01 78.24 Starch and sucrose metabolismLactococcus lactis subsp. lactisBeta-phosphoglucomutaseBeta-phosphoglucomutase [EC:5.4.2.6] 3.40.50.1000 140 7 83 3.06 3.65
1zjjB01 78.21 4-nitrophenyl phosphatase [EC:3.1.3.41]Pyrococcus horikoshiiGamma-Hexachlorocyclohexane degradationPutative uncharacterized protein PH1952 3.40.50.1000 146 13 83 3.57 4.29
2hdoA01 78.18 Phosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus plantarumMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase (Putative) 3.40.50.1000 134 10 81 3.71 4.56
2i6xA01 77.81 Hydrolase, haloacid dehalogenase-like familyPutative hydrolase of the HAD superfamilyPorphyromonas gingivalis 3.40.50.1000 127 19 72 3.12 4.32
1rkuA01 77.36 Glycine, serine and threonine metabolismMetabolic pathwaysPhosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]Pseudomonas aeruginosaHomoserine kinase 3.40.50.1000 111 19 65 2.80 4.30
3cnhA01 76.89 Hydrolase family proteinPutative hydrolase of the HAD superfamilyDeinococcus radiodurans 3.40.50.1000 114 9 70 3.31 4.66
1ltqA02 76.83 Polynucleotide kinaseEnterobacteria phage T4 3.40.50.1000 136 12 70 3.41 4.85
2oycA01 76.64 Vitamin B6 metabolismPyridoxal phosphate phosphataseHomo sapiensPyridoxal phosphatase [EC:3.1.3.74]Metabolic pathways 3.40.50.1000 167 11 76 3.59 4.72
3bwvA01 76.62 Putative 5'(3')-deoxyribonucleotidaseStaphylococcus epidermidis ATCC 12228 3.40.50.1000 121 10 72 3.21 4.40
2qltA01 76.39 Response to osmotic stressNucleusProtein bindingMetabolic pathwaysCytoplasm 3.40.50.1000 171 9 78 3.87 4.90
2p11A01 76.31 Burkholderia xenovorans LB400Putative uncharacterized protein 3.40.50.1000 140 12 76 3.37 4.39
1yc5A01 75.93 Amino sugar and nucleotide sugar metabolismThermotoga maritimaNAD-dependent deacetylase [EC:3.5.1.-]NAD-dependent deacetylaseMetabolic pathways 3.40.50.1220 150 9 83 4.13 4.96
2ghtA00 74.37 CTD phosphatase activityProtein dephosphorylationRegulation of transcription from RNA polymerase II promoterCarboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1Nucleus 3.40.50.1000 180 10 66 3.30 4.95
1kjnA00 74.10 Methanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.50.10160 148 8 78 3.84 4.88
1iirA02 73.13 Glycosyltransferase GtfBAmycolatopsis orientalis 3.40.50.2000 161 8 70 3.47 4.90
Displaying entries 1 to 49 (page 1 of 1)


Domain ATOM Sequence

>pdb|1l6rA01
IRLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFN
RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKHFEL    

Domain COMBS Sequence

>pdb|1l6rA01
IRLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFN
RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKHFEL    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:07

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"