CATH Domain: 1l2lA01 XML data for domain: 1l2lA01

Molscript image for 1l2lA01
1l2lA01
PDB coordinates for domain 1l2lA01

PDB 1l2l, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.1190 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase
3.40.1190.20 Gene3D
3.40.1190.20.17
3.40.1190.20.17.1
3.40.1190.20.17.1.1
3.40.1190.20.17.1.1.1
3.40.1190.20.17.1.1.1.1

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Segment boundaries for domain 1l2lA01

Chopping figure for domain 1l2lA01
DomainStart PDB ResidueStop PDB Residue
1l2lA01 7 35
1l2lA01 114 176
1l2lA01 206 454
1l2lA02 36 113
1l2lA02 177 204

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.1190.20.17.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3drwB01 85.24 Pyrococcus horikoshiiADP-specific phosphofructokinaseADP-specific phosphofructokinase [EC:2.7.1.146] 3.40.1190.20 330 28 90 2.60 2.88
1tyyB00 74.35 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismFructose and mannose metabolismMetabolic pathwaysFructokinase [EC:2.7.1.4] 3.40.1190.20 292 9 66 3.24 4.88
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1l2lA01
WESLYEKALDKVEASIRKVRGVLLAYNTNGGQVGIMANLLGGVYGIPVIAHVPQLSELQASLFLDGPIYVPTRLIHPREF
EDDDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTPDEVVRLEIV
KLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVKRIHFHTYGYYLALTREKGEHVRD
ALLFSALAAATKAMKGNIEKLSDIREGLAVPIGEQGLEVEKILEKEFSLRDGIGSIEDYQLTFIPTKGIGDTISSSAFVS
EF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1l2lA01
MITMTNWESLYEKALDKVEASIRKVRGVLLAYNTNGGQVGIMANLLGGVYGIPVIAHVPQLSELQASLFLDGPIYVPTFE
RGELRLIHPREFRKGEEDDDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAH
LEFAFTPDEVVRLEIVKLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVKRIHFHTY
GYYLALTREKGEHVRDALLFSALAAATKAMKGNIEKLSDIREGLAVPIGEQGLEVEKILEKEFSLRDGIGSIEDYQLTFI
PTKVVKKPKSTVGIGDTISSSAFVSEF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:07

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"