CATH Domain: 1l0qA02 XML data for domain: 1l0qA02

Molscript image for 1l0qA02
1l0qA02
PDB coordinates for domain 1l0qA02

PDB 1l0q, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.670 Gene3D
2.60.40.670.1
2.60.40.670.1.1
2.60.40.670.1.1.1
2.60.40.670.1.1.1.1
2.60.40.670.1.1.1.1.1

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Segment boundaries for domain 1l0qA02

Chopping figure for domain 1l0qA02
DomainStart PDB ResidueStop PDB Residue
1l0qA01 1 301
1l0qA02 302 391

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 2.60.40.670.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ulvA03 83.72 GlucodextranaseArthrobacter globiformis 2.60.40.1560 86 9 86 2.66 3.07
1b4rA00 83.67 Integral to plasma membranePolycystin-1Homophilic cell adhesionHomo sapiensProtein binding 2.60.40.670 80 22 84 2.22 2.63
3cmgA04 80.89 Putative beta-galactosidaseBacteroides fragilis NCTC 9343 2.60.40.1560 87 11 88 3.89 4.38
1f00I01 80.60 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 2.60.40.920 95 12 82 2.95 3.59
1cwvA02 80.12 InvasinYersinia pseudotuberculosis 2.60.40.920 97 15 80 3.30 4.10
1cwvA03 79.90 InvasinYersinia pseudotuberculosis 2.60.40.920 102 12 75 2.74 3.63
1f00I02 77.50 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 2.60.40.1080 89 7 78 3.32 4.21
1cwvA04 76.74 InvasinYersinia pseudotuberculosis 2.60.40.1080 91 10 81 3.67 4.51
1dqiA00 75.77 Pyrococcus furiosusSuperoxide reductaseSuperoxide reductase [EC:1.15.1.2] 2.60.40.730 124 5 58 2.65 4.56
1kmtA00 74.51 Anti-apoptosisCellular component movementIdentical protein bindingCytoskeletonNeurotrophin signaling pathway 2.70.50.30 138 5 61 2.95 4.79
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1l0qA02
PVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVN
VVLKGSPTPS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1l0qA02
PVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVN
VVLKGSPTPS
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:26

Cut based on decision in database "DomChop" on "cathdb"