CATH Domain: 1l0qA01 XML data for domain: 1l0qA01

Molscript image for 1l0qA01
1l0qA01
PDB coordinates for domain 1l0qA01

PDB 1l0q, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.130 7 Propellor
2.130.10 Methylamine Dehydrogenase; Chain H
2.130.10.10 YVTN repeat-like/Quinoprotein amine dehydrogenase Gene3D
2.130.10.10.24
2.130.10.10.24.1
2.130.10.10.24.1.1
2.130.10.10.24.1.1.1
2.130.10.10.24.1.1.1.1

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Segment boundaries for domain 1l0qA01

Chopping figure for domain 1l0qA01
DomainStart PDB ResidueStop PDB Residue
1l0qA01 1 301
1l0qA02 302 391

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 2.130.10.10.24.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1p22A02 82.63 Ubiquitin-dependent protein catabolic processF-box/WD repeat-containing protein 1AHomo sapiensProtein bindingSignal transduction 2.130.10.10 295 9 84 1.77 2.11
1ijqA01 77.89 Low-density lipoprotein particle clearanceIntestinal cholesterol absorptionVery-low-density lipoprotein receptor activityProtein O-linked glycosylationLow-density lipoprotein receptor 2.120.10.30 254 15 82 4.03 4.91
1npeA00 77.48 Mus musculusCell-matrix adhesionNidogen-1Collagen bindingBasement membrane 2.120.10.30 263 13 82 3.87 4.68
1pguB01 77.27 Mating projection tipResponse to osmotic stressNucleusActin bindingActin filament depolymerization 2.130.10.10 279 10 82 3.43 4.16
1sqjB01 73.99 Oligoxyloglucan reducing end-specific cellobiohydrolaseGeotrichum sp. M128 2.130.10.140 322 10 81 3.81 4.68
2vdrA00 73.31 Integrin alpha 2BIdentical protein bindingPathways in cancerHematopoietic cell lineageDilated cardiomyopathy 2.130.10.130 452 7 58 2.60 4.43
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1l0qA01
STFAYIANSESDNISVIDVTSNKVTATIPVGSNPGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV
SPDGKQVYVTNASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKG
IAVTPDGTKVYVANFDSSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSIDTGTNKITARIPVGP
DPAGIAVTPDGKKVYVALSFNTVSVIDTATNTITATAVGKNPYASGQFIGSIPVQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1l0qA01
STFAYIANSESDNISVIDVTSNKVTATIPVGSNPXGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA
VSPDGKQVYVTNXASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSP
KGIAVTPDGTKVYVANFDSXSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSXIDTGTNKITARI
PVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATXAVGKNPYASGQFIGSIPVQ
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:26

Cut based on decision in database "DomChop" on "cathdb"