CATH Domain: 1kzyC02 XML data for domain: 1kzyC02

Molscript image for 1kzyC02
1kzyC02
PDB coordinates for domain 1kzyC02

PDB 1kzy, Chain C, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.10190 Gene3D
3.40.50.10190.6
3.40.50.10190.6.1
3.40.50.10190.6.1.1
3.40.50.10190.6.1.1.1
3.40.50.10190.6.1.1.1.1

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Segment boundaries for domain 1kzyC02

Chopping figure for domain 1kzyC02
DomainStart PDB ResidueStop PDB Residue
1kzyC01 1714 1850
1kzyC02 1851 1972

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.10190.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cdzA00 79.90 DNA repair protein XRCC1Homo sapiensProtein binding 3.40.50.10190 96 11 77 3.36 4.31
1t1jA00 78.34 Pseudomonas aeruginosaPutative uncharacterized protein 3.40.50.10400 119 8 66 3.02 4.55
1yqeA02 73.45 Hypothetical proteinArchaeoglobus fulgidusD-tyrosyl-tRNA(Tyr) deacylase 3.40.50.10700 96 11 68 3.28 4.82
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kzyC02
GYSLEEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASV
LKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kzyC02
GYSLEEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASV
LKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:06

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"