CATH Domain: 1kza100 XML data for domain: 1kza100

Molscript image for 1kza100
1kza100
PDB coordinates for domain 1kza100

PDB 1kza, Chain 1, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.18
3.10.100.10.18.1
3.10.100.10.18.1.1
3.10.100.10.18.1.1.1
3.10.100.10.18.1.1.1.1

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Segment boundaries for domain 1kza100

Chopping figure for domain 1kza100
DomainStart PDB ResidueStop PDB Residue
1kza100 111 225

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 3.10.100.10.18.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1h8uB00 89.94 Bone marrow proteoglycanHomo sapiensBone marrow proteoglycanExtracellular regionSugar binding 3.10.100.10 116 19 93 1.93 2.07
1jznA00 88.09 Galactose-specific lectinCrotalus atrox 3.10.100.10 135 17 85 1.71 2.01
1byfA00 88.08 LectinPolyandrocarpa misakiensis 3.10.100.10 123 20 91 2.13 2.34
1hq8A00 86.58 Positive regulation of interferon-gamma productionPositive regulation of natural killer cell mediated cytotoxicityPositive regulation of nitric oxide biosynthetic processMHC class I protein bindingNatural killer cell activation 3.10.100.10 123 11 87 2.09 2.38
3bdwA00 85.77 Killer cell lectin-like receptor subfamily D, member 1Natural killer cell mediated cytotoxicityNatural killer cells antigen CD94Antigen processing and presentationGraft-versus-host disease 3.10.100.10 123 15 90 2.73 3.03
1rjhA00 85.13 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 29 88 2.51 2.85
1sl6A00 85.02 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 168 22 67 1.48 2.20
1eslA00 84.35 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 157 26 69 1.93 2.78
3fd4A00 81.20 Glycoprotein 42Human herpesvirus 4 (strain B95-8) 3.10.100.10 140 13 74 2.39 3.22
1f00I03 80.20 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 3.10.100.10 98 12 68 2.95 4.29
1cwvA05 79.94 InvasinYersinia pseudotuberculosis 3.10.100.10 100 8 69 2.72 3.91
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kza100
NVGKKYFMSSVRRMPLNRAKALCSELQGTVATPRNAEENRAIQNVAKDVAFLGITDQRTENVFEDLTGNRVRYTNWNEGE
PNNVGSGENCVVLLTNGKWNDVPCSDSFLVVCEFS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kza100
NVGKKYFMSSVRRMPLNRAKALCSELQGTVATPRNAEENRAIQNVAKDVAFLGITDQRTENVFEDLTGNRVRYTNWNEGE
PNNVGSGENCVVLLTNGKWNDVPCSDSFLVVCEFS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:13

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"