CATH Domain: 1kyfA01 XML data for domain: 1kyfA01

Molscript image for 1kyfA01
1kyfA01
PDB coordinates for domain 1kyfA01

PDB 1kyf, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.1030 Gene3D
2.60.40.1030.1
2.60.40.1030.1.1
2.60.40.1030.1.1.1
2.60.40.1030.1.1.1.1
2.60.40.1030.1.1.1.1.1

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Segment boundaries for domain 1kyfA01

Chopping figure for domain 1kyfA01
DomainStart PDB ResidueStop PDB Residue
1kyfA01 692 825
1kyfA02 826 938

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.60.40.1030.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2a7bA00 83.98 Mus musculusPerinuclear region of cytoplasmAP-1 complex subunit gamma-1Protein bindingTrans-Golgi network 2.60.40.1230 120 10 83 2.62 3.13
2pr9A02 78.78 Huntington's diseaseEndocytosisRattus norvegicusClathrin vesicle coatAP-2 complex subunit mu-1 2.60.40.1170 112 6 66 2.68 4.04
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kyfA01
GSPGIRLGSSEDNFARFVCKNNGVLFENQLLQIGLKSEFRQNLGRMFIFYGNKTSTQFLNFTPTLICADDLQTNLNLQTK
PVDPTVDGGAQVQQVVNIECISDFTEAPVLNIQFRYGGTFQNVSVKLPITLNKF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kyfA01
GSPGIRLGSSEDNFARFVCKNNGVLFENQLLQIGLKSEFRQNLGRMFIFYGNKTSTQFLNFTPTLICADDLQTNLNLQTK
PVDPTVDGGAQVQQVVNIECISDFTEAPVLNIQFRYGGTFQNVSVKLPITLNKF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:06

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"