Set cath from cathlist by auto on 05 Mar 2006 19:18
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
| CATH Code | Level Description | Links |
|---|---|---|
3
| Alpha Beta | |
3.40
| 3-Layer(aba) Sandwich | |
3.40.50
| Rossmann fold | |
3.40.50.880
| Gene3D | |
3.40.50.880.6
| ||
3.40.50.880.6.1
| ||
3.40.50.880.6.1.1
| ||
3.40.50.880.6.1.1.1
| ||
3.40.50.880.6.1.1.1.1
|
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1kwgA01 | 1 | 394 |
| 1kwgA02 | 395 | 594 |
| 1kwgA03 | 595 | 644 |
There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.880.6.1.1.1.1 (SIMAX score < 5)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
![]() |
1qdlB00 | 76.89 | 3.40.50.880 | 195 | 9 | 79 | 3.33 | 4.22 | |
![]() |
1gpmA01 | 76.36 | 3.40.50.880 | 198 | 10 | 77 | 3.31 | 4.27 | |
![]() |
1i7qB00 | 76.30 | 3.40.50.880 | 192 | 11 | 76 | 3.46 | 4.52 |
>pdb|1kwgA02 VAQAPVALVFDYEAAWIYEVQPQGAEWSYLGLVYLFYSALRRLGLDVDVVPPGASLRGYAFAVVPSLPIVREEALEAFRE AEGPVLFGPRSGSKTETFQIPKELPPGPLQALLPLKVVRVESLPPGLLEVAEGALGRFPLGLWREWVEAPLKPLLTFQDG KGALYREGRYLYLAAWPSPELAGRLLSALAAEAGLKVLSL
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"