CATH Domain: 1kv7A01 XML data for domain: 1kv7A01

Molscript image for 1kv7A01
1kv7A01
PDB coordinates for domain 1kv7A01

PDB 1kv7, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.420 Cupredoxins - blue copper proteins Gene3D
2.60.40.420.3
2.60.40.420.3.1
2.60.40.420.3.1.1
2.60.40.420.3.1.1.1
2.60.40.420.3.1.1.1.1

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Segment boundaries for domain 1kv7A01

Chopping figure for domain 1kv7A01
DomainStart PDB ResidueStop PDB Residue
1kv7A01 31 174
1kv7A02 175 326
1kv7A03 345 516

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 2.60.40.420.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gskA01 85.26 Spore coat protein ABacillus subtilisSpore coat protein A 2.60.40.420 167 26 79 1.74 2.18
1aozA01 85.18 L-ascorbate oxidaseCucurbita pepo var. melopepo 2.60.40.420 130 24 86 2.73 3.17
2qt6A01 84.75 LaccaseLentinus tigrinus 2.60.40.420 132 23 84 1.82 2.15
1ibyA00 81.47 Chain A, Red Copper Protein NitrosocyaninNitrosomonas europaea 2.60.40.420 112 13 70 2.49 3.52
1sddB02 79.94 Coagulation factor VBos taurusCoagulation factor V (labile factor)Complement and coagulation cascades 2.60.40.420 125 10 78 3.91 4.98
1kdjA00 76.16 Identical protein bindingPlastocyaninDryopteris crassirhizoma 2.60.40.420 102 4 64 3.01 4.66
3cvbA00 75.17 PlastocyaninPhormidium laminosum 2.60.40.420 102 16 65 3.09 4.73
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kv7A01
RPTLPIPDLLTTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE
VDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kv7A01
AERPTLPIPDLLTTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP
GEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPK
BLAST against CATH

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Domain History Events (7)

Domain assigned by lewis on 09 Jan 2007 13:16

Assigning domain 1kv7A01 to 2.60.40.420 (as agreed with the CATH update team) after the chain has been rechopped. The reason is that the domain is very similar to the old domain 1kv7A01 (from the previous chopping at "Sun Mar 5 17:06:11 2006") which was in 2.60.40.420 at the time the chain was unchopped.

Flow stage update by auto on 22 Dec 2006 03:43

No satisfactory AssignClose result found.

Flow stage update by auto on 22 Dec 2006 03:40

No in_process hits for Domain "1kv7A01" ready to be processed

Flow stage update by auto on 22 Dec 2006 03:40

NW result present for Domain "1kv7A01"

Flow stage update by auto on 21 Dec 2006 15:34

All required files are present for Domain "1kv7A01"

Flow stage update by auto on 21 Dec 2006 15:34

Beginning processing for Domain "1kv7A01"

Insertion by cuff on 21 Dec 2006 11:34

good batch of choppings