CATH Domain: 1ktbA02 XML data for domain: 1ktbA02

Molscript image for 1ktbA02
1ktbA02
PDB coordinates for domain 1ktbA02

PDB 1ktb, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.1180 Golgi alpha-mannosidase II Gene3D
2.60.40.1180.11
2.60.40.1180.11.1
2.60.40.1180.11.1.1
2.60.40.1180.11.1.1.1
2.60.40.1180.11.1.1.1.1

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Segment boundaries for domain 1ktbA02

Chopping figure for domain 1ktbA02
DomainStart PDB ResidueStop PDB Residue
1ktbA01 1 291
1ktbA02 298 388

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 2.60.40.1180.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3cc1A02 86.65 BH1870 proteinBacillus halodurans 2.60.40.1180 84 13 91 1.81 1.98
1j0hA04 84.77 NeopullulanaseGeobacillus stearothermophilus 2.60.40.1180 83 9 87 2.54 2.89
1wzlA04 83.84 Neopullulanase 2Thermoactinomyces vulgaris 2.60.40.1180 83 9 87 2.67 3.04
1ea9C04 82.35 Bacillus sp.Cyclomaltodextrinase 2.60.40.1180 81 12 85 2.67 3.12
3edfA03 82.12 CyclomaltodextrinaseFlavobacterium sp. 92 2.60.40.1180 80 18 85 3.25 3.79
1uokA03 80.95 Bacillus cereusOligo-1,6-glucosidase 2.60.40.1180 78 11 84 4.08 4.82
1zjaA03 80.15 Pseudomonas mesoacidophilaSucrose isomerase 2.60.40.1180 78 8 78 2.93 3.76
1iv8A05 80.09 Sulfolobus acidocaldariusGlycosyltrehalose-producing enzyme 2.60.40.1180 66 16 72 2.70 3.72
1ua7A02 79.98 Starch and sucrose metabolismBacillus subtilisAlpha-amylaseAlpha-amylase [EC:3.2.1.1]Metabolic pathways 2.60.40.1180 78 11 81 3.66 4.50
2opkB01 77.94 Ralstonia eutropha JMP134Cupin 2 domain-containing proteinPutative uncharacterized protein 2.60.120.10 90 6 74 3.70 4.95
1g5aA04 77.25 AmylosucraseNeisseria polysaccharea 2.60.40.1180 74 13 76 3.21 4.17
1lwjA03 76.40 4-alpha-glucanotransferase [EC:2.4.1.25]Thermotoga maritimaStarch and sucrose metabolism4-alpha-glucanotransferaseMetabolic pathways 2.60.40.1180 50 18 52 2.01 3.81
1yllC02 75.87 Hypothetical proteinPseudomonas aeruginosaPutative uncharacterized protein 2.60.120.10 107 6 65 2.41 3.68
2bs9A01 75.24 Geobacillus stearothermophilusBeta-xylosidase 2.60.40.1500 136 5 58 2.76 4.75
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ktbA02
GRRIIKEGSHIEVFLRPLSQAASALVFFSRRTDMPFRYTTSLAKLGFPMGAAYEVQDVYSGKIISGLKTGDNFTVIINPS
GVVMWYLCPKA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ktbA02
GRRIIKEGSHIEVFLRPLSQAASALVFFSRRTDMPFRYTTSLAKLGFPMGAAYEVQDVYSGKIISGLKTGDNFTVIINPS
GVVMWYLCPKA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:05

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"