CATH Domain: 1ksiA01 XML data for domain: 1ksiA01

Molscript image for 1ksiA01
1ksiA01
PDB coordinates for domain 1ksiA01

PDB 1ksi, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.450 Nuclear Transport Factor 2; Chain: A,
3.10.450.40 Gene3D
3.10.450.40.11
3.10.450.40.11.1
3.10.450.40.11.1.1
3.10.450.40.11.1.1.1
3.10.450.40.11.1.1.1.1

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Segment boundaries for domain 1ksiA01

Chopping figure for domain 1ksiA01
DomainStart PDB ResidueStop PDB Residue
1ksiA01 6 101
1ksiA02 102 197
1ksiA03 231 646

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.10.450.40.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1tu5A01 83.01 Tyrosine metabolismAmine metabolic processBos taurusCopper ion bindingPrimary-amine oxidase [EC:1.4.3.21] 3.10.450.40 108 12 80 2.45 3.04
2gu3A02 78.51 Uncharacterized protein ypmBBacillus subtilis 3.10.450.40 63 7 64 2.75 4.26
2gu3A01 77.82 Uncharacterized protein ypmBBacillus subtilis 3.10.450.40 65 4 66 2.74 4.11
3b7cA00 75.73 Shewanella oneidensisPutative uncharacterized protein 3.10.450.50 115 8 51 2.41 4.70
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ksiA01
VQHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLR
IRSIVSDNIHNGYGFP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ksiA01
VQHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLR
IRSIVSDNIHNGYGFP
BLAST against CATH

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Domain History Events (2)

Domain assigned by lewis on 18 Jan 2007 19:37

Reassigning this domain to its previous classification as part of fragment fixing process in preparation for release v3.1.0.

Insertion by lewis on 18 Jan 2007 19:37

Rechopping chains just before release v3.1.0 in order to fix missing fragments.