CATH Domain: 1ks9A01 XML data for domain: 1ks9A01

Molscript image for 1ks9A01
1ks9A01
PDB coordinates for domain 1ks9A01

PDB 1ks9, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.720 NAD(P)-binding Rossmann-like Domain Gene3D
3.40.50.720.63
3.40.50.720.63.1
3.40.50.720.63.1.1
3.40.50.720.63.1.1.1
3.40.50.720.63.1.1.1.1

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Segment boundaries for domain 1ks9A01

Chopping figure for domain 1ks9A01
DomainStart PDB ResidueStop PDB Residue
1ks9A01 1 167
1ks9A02 168 290

Structural Neighbourhood (19 entries)

There are 19 matching structural neighberhood comparisons for CATH ID 3.40.50.720.63.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 19 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ew2B01 85.51 2-dehydropantoate 2-reductase [EC:1.1.1.169]Pantothenate and CoA biosynthesis2-dehydropantoate 2-reductaseMetabolic pathwaysEnterococcus faecalis 3.40.50.720 174 19 92 2.61 2.82
1i36A01 82.06 Methanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.50.720 159 10 85 3.11 3.63
2pv7A01 81.66 T-proteinNovobiocin biosynthesisHaemophilus influenzaePhenylalanine, tyrosine and tryptophan biosynthesisPrephenate dehydrogenase [EC:1.3.1.12] 3.40.50.720 154 15 80 3.00 3.74
2qytA01 81.57 Porphyromonas gingivalis2-dehydropantoate 2-reductase 3.40.50.720 179 19 91 3.24 3.56
1np3B01 80.93 Pantothenate and CoA biosynthesisMetabolic pathwaysValine, leucine and isoleucine biosynthesisKetol-acid reductoisomerasePseudomonas aeruginosa 3.40.50.720 182 11 85 4.21 4.94
3ckyA01 80.75 Eubacterium barkeri2-hydroxymethyl glutarate dehydrogenase 3.40.50.720 163 14 88 3.63 4.12
3d1lB01 80.60 Bacteroides fragilis NCTC 9343Putative uncharacterized protein 3.40.50.720 151 11 84 2.99 3.54
2rcyA01 80.25 Arginine and proline metabolismMetabolic pathwaysPlasmodium falciparum 3D7Pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2] 3.40.50.720 148 10 82 3.09 3.74
2amfA01 80.21 Arginine and proline metabolismMetabolic pathwaysPutative pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2]Streptococcus pyogenes serotype M1 3.40.50.720 148 15 85 3.18 3.71
2cvzA01 80.13 Valine, leucine and isoleucine degradationMetabolic pathwaysThermus thermophilus HB83-hydroxyisobutyrate dehydrogenase3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] 3.40.50.720 153 12 87 3.36 3.84
1ur5C01 78.96 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismChloroflexus aurantiacus J-10-flMetabolic pathways 3.40.50.720 136 13 64 2.81 4.35
2i76A01 77.92 Thermotoga maritimaPutative uncharacterized protein 3.40.50.720 142 7 82 3.74 4.53
1vpdA01 77.90 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysSalmonella enterica subsp. enterica serovar Typhimurium2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]Tartronate semialdehyde reductase (TSAR) 3.40.50.720 154 11 85 3.46 4.07
1hyhA01 77.65 Weissella confusaL-2-hydroxyisocaproate dehydrogenase 3.40.50.720 141 14 63 2.84 4.47
3d0oA01 77.42 Pyruvate metabolismPropanoate metabolismMetabolic pathwaysCysteine and methionine metabolismGlycolysis / Gluconeogenesis 3.40.50.720 143 11 64 3.13 4.89
1oi7A01 77.08 Succinyl-CoA ligase [ADP-forming] subunit alphaThermus thermophilus 3.40.50.720 122 14 59 2.05 3.42
1hyeA01 77.06 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Methanocaldococcus jannaschiiPyruvate metabolismMetabolic pathways 3.40.50.720 147 13 64 3.17 4.90
3hhpA01 76.90 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.40.50.720 138 19 62 2.87 4.61
1yl5A01 75.54 Metabolic pathwaysLysine biosynthesisDihydrodipicolinate reductase [EC:1.3.1.26]Dihydrodipicolinate reductaseMycobacterium tuberculosis 3.40.50.720 140 9 63 2.95 4.65
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Displaying entries 1 to 19 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ks9A01
MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAV
KSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL
PDVAWHN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ks9A01
MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAV
KSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL
PDVAWHN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:05

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"