CATH Domain: 1krhA03 XML data for domain: 1krhA03

Molscript image for 1krhA03
1krhA03
PDB coordinates for domain 1krhA03

PDB 1krh, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.80 Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module Gene3D
3.40.50.80.6
3.40.50.80.6.1
3.40.50.80.6.1.1
3.40.50.80.6.1.1.1
3.40.50.80.6.1.1.1.1

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Segment boundaries for domain 1krhA03

Chopping figure for domain 1krhA03
DomainStart PDB ResidueStop PDB Residue
1krhA01 2 104
1krhA02 105 201
1krhA03 202 335

Structural Neighbourhood (25 entries)

There are 25 matching structural neighberhood comparisons for CATH ID 3.40.50.80.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 25 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1qfjA02 87.18 Porphyrin and chlorophyll metabolismAquacobalamin reductase / NAD(P)H-flavin reductase [EC:1.16.1.3 1.5.1.29]NAD(P)H-flavin reductaseEscherichia coli K-12 3.40.50.80 135 23 96 2.53 2.63
2r6hA02 86.76 Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:1.6.5.-]Porphyromonas gingivalisNADH:ubiquinone oxidoreductase, Na translocating, F subunit 3.40.50.80 114 20 79 1.73 2.19
1ep3B02 86.51 Lactococcus lactis subsp. cremoris MG1363Dihydroorotate dehydrogenase electron transfer subunitProtein bindingDihydroorotate dehydrogenase electron transfer subunit 3.40.50.80 117 18 85 2.15 2.51
1cqxA03 85.03 Nitric oxide dioxygenase [EC:1.14.12.17]Ralstonia eutropha H16Flavohemoprotein 3.40.50.80 142 21 90 2.50 2.75
2rc5A02 84.94 Leptospira interrogansFerredoxin--NADP reductase 3.40.50.80 161 23 83 3.45 4.15
2piaA02 84.82 Burkholderia cepaciaPhthalate dioxygenase reductase 3.40.50.80 121 23 90 3.51 3.89
1f20A01 84.18 Response to heatNegative regulation of insulin secretionSynapseAmino acid bindingNuclear membrane 3.40.50.80 163 24 79 2.90 3.66
2aefA01 79.13 Methanothermobacter thermautotrophicus str. Delta HCalcium-gated potassium channel mthK 3.40.50.720 115 8 70 2.68 3.82
2hmtA00 76.48 Trk system potassium uptake protein TrkABacillus subtilisKtr system potassium uptake protein A 3.40.50.720 139 6 69 2.83 4.10
1lssA00 75.86 Trk system potassium uptake protein TrkATrk system potassium uptake protein trkA homologMethanocaldococcus jannaschii 3.40.50.720 132 5 71 3.07 4.29
1ur5C01 75.83 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismChloroflexus aurantiacus J-10-flMetabolic pathways 3.40.50.720 136 8 71 3.24 4.54
1usgA02 75.78 ABC transportersLeucine-specific-binding proteinBranched-chain amino acid transport system substrate-binding proteinEscherichia coli K-12 3.40.50.2300 144 7 65 3.10 4.75
3hhpA01 75.31 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.40.50.720 138 6 73 3.63 4.96
1hyeA01 74.54 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Methanocaldococcus jannaschiiPyruvate metabolismMetabolic pathways 3.40.50.720 147 4 68 3.25 4.73
3a06B01 74.52 Terpenoid backbone biosynthesisThermotoga maritima1-deoxy-D-xylulose 5-phosphate reductoisomerase1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]Metabolic pathways 3.40.50.720 141 6 78 3.63 4.61
1hyhA01 74.09 Weissella confusaL-2-hydroxyisocaproate dehydrogenase 3.40.50.720 141 5 68 3.31 4.81
1o6zA02 73.97 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismHaloarcula marismortuiMetabolic pathways 3.40.50.720 142 9 69 3.45 4.95
1f8fA02 73.61 Acinetobacter calcoaceticusBenzyl alcohol dehydrogenase 3.40.50.720 137 8 78 3.82 4.89
2x5oA01 73.55 D-Glutamine and D-glutamate metabolismPeptidoglycan biosynthesisMetabolic pathwaysUDP-N-acetylmuramoylalanine--D-glutamate ligaseUDP-N-acetylmuramoylalanine-D-glutamate ligase activity 3.40.50.720 92 13 67 3.13 4.66
2i6xA01 73.54 Hydrolase, haloacid dehalogenase-like familyPutative hydrolase of the HAD superfamilyPorphyromonas gingivalis 3.40.50.1000 127 7 79 3.91 4.94
2c82A01 73.44 Terpenoid backbone biosynthesisMetabolic pathways1-deoxy-D-xylulose 5-phosphate reductoisomerase1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]Mycobacterium tuberculosis 3.40.50.720 141 10 78 3.63 4.61
2jbaA00 73.05 Two-component systemPhosphate regulon transcriptional regulatory protein phoBTwo-component system, OmpR family, phosphate regulon response regulator PhoBProtein bindingEscherichia coli K-12 3.40.50.2300 125 6 59 2.95 4.94
3eq2B01 72.69 Pseudomonas aeruginosaProbable two-component response regulator 3.40.50.2300 103 7 58 2.93 4.97
2b0cA01 71.84 Phosphatase yihXGlucose-1-phosphatase activityPutative hydrolase of the HAD superfamilyEscherichia coli K-12 3.40.50.1000 133 5 74 3.72 4.98
1j6uA01 71.51 D-Glutamine and D-glutamate metabolismThermotoga maritimaUDP-N-acetylmuramate--L-alanine ligaseUDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]Peptidoglycan biosynthesis 3.40.50.720 85 5 62 2.95 4.71
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Displaying entries 1 to 25 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1krhA03
GSFYLRDVKRPVLMLAGGTGIAPFLSMLQVLEQKGSEHPVRLVFGVTQDCDLVALEQLDALQQKLPWFEYRTVVAHAESQ
HERKGYVTGHIEYDWLNGGEVDVYLCGPVPMVEAVRSWLDTQGIQPANFLFEKF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1krhA03
GSFYLRDVKRPVLMLAGGTGIAPFLSMLQVLEQKGSEHPVRLVFGVTQDCDLVALEQLDALQQKLPWFEYRTVVAHAESQ
HERKGYVTGHIEYDWLNGGEVDVYLCGPVPMVEAVRSWLDTQGIQPANFLFEKF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:05

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"