CATH Domain: 1konA03 XML data for domain: 1konA03

Molscript image for 1konA03
1konA03
PDB coordinates for domain 1konA03

PDB 1kon, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.980 Gene3D
3.30.70.980.3
3.30.70.980.3.1
3.30.70.980.3.1.1
3.30.70.980.3.1.1.1
3.30.70.980.3.1.1.1.1

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Segment boundaries for domain 1konA03

Chopping figure for domain 1konA03
DomainStart PDB ResidueStop PDB Residue
1konA01 3 81
1konA02 82 129
1konA02 205 246
1konA03 130 204

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.30.70.980.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1yx2A02 79.62 Nitrogen metabolismAminomethyltransferase [EC:2.1.2.10]One carbon pool by folateBacillus subtilisGlycine, serine and threonine metabolism 3.30.70.1400 81 5 71 2.76 3.85
1utaA00 77.70 Membrane fractionCell cycle cytokinesisCell division protein FtsNCell division protein ftsNProtein binding 3.30.70.1070 77 5 85 4.28 4.99
2hiyB01 76.77 Streptococcus pneumoniaePutative uncharacterized protein 3.30.70.1280 87 10 80 3.97 4.93
1vlyA02 76.73 RNA modificationTRNA-modifying protein ygfZFolic acid bindingEscherichia coli K-12 3.30.70.1400 84 2 72 2.90 3.99
2hekA02 76.64 Aquifex aeolicusPutative uncharacterized protein 3.30.70.1370 88 12 59 2.12 3.59
2x3dF01 76.35 Hypothetical proteinSulfolobus solfataricusPutative uncharacterized protein 3.30.70.1340 84 12 79 3.96 4.96
1wj9A01 76.00 Thermus thermophilus HB8Putative uncharacterized protein TTHB192 3.30.70.1200 87 5 71 3.23 4.53
1sqgA03 74.32 Ribosomal RNA small subunit methyltransferase B [EC:2.1.1.-]Ribosomal RNA small subunit methyltransferase BRRNA (cytosine-C5-)-methyltransferase activityRRNA base methylationEscherichia coli K-12 3.30.70.1170 58 12 73 3.43 4.68
3dnjB00 73.62 ATP-dependent Clp protease adaptor protein ClpSCaulobacter vibrioidesATP-dependent Clp protease adapter protein clpS 3.30.1390.10 75 6 85 4.21 4.93
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1konA03
VAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPST
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1konA03
VAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPST
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:25

Cut based on decision in database "DomChop" on "cathdb"