CATH Domain: 1kmvA00 XML data for domain: 1kmvA00

Molscript image for 1kmvA00
1kmvA00
PDB coordinates for domain 1kmvA00

PDB 1kmv, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.430 Dihydrofolate Reductase, subunit A
3.40.430.10 Dihydrofolate Reductase, subunit A Gene3D
3.40.430.10.1
3.40.430.10.1.1
3.40.430.10.1.1.1
3.40.430.10.1.1.1.1
3.40.430.10.1.1.1.1.1

[top]
Segment boundaries for domain 1kmvA00

Chopping figure for domain 1kmvA00
DomainStart PDB ResidueStop PDB Residue
1kmvA00 1 186

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 3.40.430.10.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2fziA00 89.42 Pneumocystis cariniiDihydrofolate reductase 3.40.430.10 206 34 88 1.75 1.98
1qzfA01 89.19 Pyrimidine metabolismThymidylate synthase [EC:2.1.1.45]One carbon pool by folateBifunctional dihydrofolate reductase-thymidylate synthaseFolate biosynthesis 3.40.430.10 176 31 93 2.04 2.18
1aoeA00 87.95 Dihydrofolate reductaseCandida albicans 3.40.430.10 192 34 91 2.57 2.80
3dauA00 87.38 One carbon pool by folateFolate biosynthesisMetabolic pathwaysDihydrofolate reductaseDihydrofolate reductase [EC:1.5.1.3] 3.40.430.10 159 29 83 1.82 2.17
2w3wA00 87.30 Dihydrofolate reductaseMycobacterium avium 3.40.430.10 164 30 86 1.94 2.25
3ix9A00 87.02 One carbon pool by folateDihydrofolate reductaseFolate biosynthesisDihydrofolate reductase [EC:1.5.1.3]Metabolic pathways 3.40.430.10 166 22 86 2.05 2.36
2bl9A00 86.80 Bifunctional dihydrofolate reductase-thymidylate synthasePlasmodium vivax 3.40.430.10 216 33 81 1.93 2.38
2w9hA00 86.65 One carbon pool by folateFolate biosynthesisMetabolic pathwaysDihydrofolate reductaseDihydrofolate reductase [EC:1.5.1.3] 3.40.430.10 157 26 83 1.79 2.14
3dfrA00 86.56 One carbon pool by folateLactobacillus caseiDihydrofolate reductaseFolate biosynthesisDihydrofolate reductase [EC:1.5.1.3] 3.40.430.10 162 25 85 1.89 2.20
1vdrA00 84.16 One carbon pool by folateDihydrofolate reductaseHaloferax volcaniiFolate biosynthesisDihydrofolate reductase [EC:1.5.1.3] 3.40.430.10 157 21 84 2.20 2.59
1cz3B00 84.02 Thermotoga maritimaDihydrofolate reductase 3.40.430.10 168 22 86 3.20 3.70
1juvA00 83.44 Dihydrofolate reductaseEnterobacteria phage T4 3.40.430.10 193 19 83 2.96 3.53
2hxvA02 80.19 Riboflavin metabolismMetabolic pathwaysThermotoga maritimaDiaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]Riboflavin-specific deaminase 3.40.430.10 193 10 80 3.30 4.11
2p4gA00 77.28 Corynebacterium diphtheriaePutative uncharacterized protein 3.40.430.10 244 12 66 3.17 4.77
[1]
Displaying entries 1 to 14 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1kmvA00
VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELK
EPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLP
EYPGVLSDVQEEKGIKYKFEVYEKND
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1kmvA00
VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELK
EPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLP
EYPGVLSDVQEEKGIKYKFEVYEKND
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:26

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:26

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:48

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"