CATH Domain: 1kmoA01 XML data for domain: 1kmoA01

Molscript image for 1kmoA01
1kmoA01
PDB coordinates for domain 1kmoA01

PDB 1kmo, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.170 Beta Complex
2.170.130 Ferric Hydroxamate Uptake Protein; Chain A, domain 1
2.170.130.10 Ferric Hydroxamate Uptake Protein; Chain A, domain 1 Gene3D
2.170.130.10.1
2.170.130.10.1.1
2.170.130.10.1.1.1
2.170.130.10.1.1.1.1
2.170.130.10.1.1.1.1.1

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Segment boundaries for domain 1kmoA01

Chopping figure for domain 1kmoA01
DomainStart PDB ResidueStop PDB Residue
1kmoA01 95 222
1kmoA02 223 741

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 2.170.130.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3cslA01 84.61 HasR proteinSerratia marcescens 2.170.130.10 128 17 95 4.02 4.22
1nqeA01 84.22 Vitamin B12 transporter btuBIron complex outermembrane recepter proteinCobalamin transportProtein bindingEscherichia coli K-12 2.170.130.10 124 24 88 2.58 2.92
3fhhA01 82.02 Iron complex outermembrane recepter proteinShigella dysenteriaeOuter membrane heme receptor ShuA 2.170.130.10 124 21 87 2.89 3.30
1xkwA01 81.71 Pseudomonas aeruginosaIron complex outermembrane recepter proteinFe(3+)-pyochelin receptor 2.170.130.10 100 18 78 2.44 3.12
2iahA02 81.66 Pseudomonas aeruginosaIron complex outermembrane recepter proteinFerripyoverdine receptor 2.170.130.10 134 17 82 2.48 2.99
1qfgA01 81.52 Toxin bindingIron ion bindingVirion bindingIron complex outermembrane recepter proteinCell outer membrane 2.170.130.10 142 19 83 2.83 3.38
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kmoA01
NDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDLAMNFGIRGLNPRLASRSTVLMDGIPVPFAPY
GQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kmoA01
NDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDLAMNFGIRGLNPRLASRSTVLMDGIPVPFAPY
GQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:49

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:49

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:04

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"