CATH Domain: 1kkoA02 XML data for domain: 1kkoA02

Molscript image for 1kkoA02
1kkoA02
PDB coordinates for domain 1kkoA02

PDB 1kko, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.120 Enolase superfamily Gene3D
3.20.20.120.1
3.20.20.120.1.1
3.20.20.120.1.1.1
3.20.20.120.1.1.1.1
3.20.20.120.1.1.1.1.1

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Segment boundaries for domain 1kkoA02

Chopping figure for domain 1kkoA02
DomainStart PDB ResidueStop PDB Residue
1kkoA01 2 164
1kkoA02 165 411

Structural Neighbourhood (25 entries)

There are 25 matching structural neighberhood comparisons for CATH ID 3.20.20.120.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 25 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1tkkA02 80.58 Bacillus subtilisL-Ala-D/L-Glu epimerase 3.20.20.120 244 14 84 4.06 4.79
2chrA02 80.04 Ralstonia eutropha JMP134Chloromuconate cycloisomeraseToluene and xylene degradationMuconate cycloisomerase [EC:5.5.1.1]Benzoate degradation via hydroxylation 3.20.20.120 202 16 78 2.52 3.19
3dgbA02 79.77 Muconate cycloisomeraseToluene and xylene degradationMuconate cycloisomerase [EC:5.5.1.1]Benzoate degradation via hydroxylationFluorobenzoate degradation 3.20.20.120 236 11 85 3.59 4.21
2pgwA02 79.46 Sinorhizobium melilotiToluene and xylene degradationBenzoate degradation via hydroxylationMuconate cycloisomerase [EC:5.5.1.1]Mandelate racemase/muconate lactonizing enzyme family protein 3.20.20.120 215 16 81 2.88 3.53
1r0mA02 79.00 Ubiquinone and other terpenoid-quinone biosynthesisN-acylamino acid racemaseO-succinylbenzoate synthase [EC:4.2.1.113]Deinococcus radioduransMetabolic pathways 3.20.20.120 230 13 83 3.91 4.70
2qgyA02 78.93 3.20.20.120 231 13 84 3.79 4.47
1mdlA02 78.80 Mandelate racemasePseudomonas putida 3.20.20.120 230 11 84 4.07 4.84
3cb3A02 78.70 Toluene and xylene degradationPolaromonas sp. JS666Mandelate racemase [EC:5.1.2.2]Mandelate racemase/muconate lactonizing enzymeBenzoate degradation via hydroxylation 3.20.20.120 233 12 84 3.91 4.63
2zadA02 78.29 Thermotoga maritimaL-Ala-D/L-Glu epimerase 3.20.20.120 222 17 82 3.40 4.13
2qdeA02 78.20 Aromatoleum aromaticum EbN1Mandelate racemase/muconate lactonizing enzyme family protein 3.20.20.120 239 17 84 3.55 4.18
2nqlA02 78.17 Agrobacterium tumefaciens str. C58Isomerase/lactonizing enzyme 3.20.20.120 214 14 81 3.33 4.09
1jpdX02 78.09 Racemase and epimerase activity, acting on amino acids and derivativesL-Ala-D/L-Glu epimeraseEscherichia coli K-12 3.20.20.120 207 13 79 3.25 4.07
2qjjC02 77.90 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain proteinStarvation sensing protein RspANovosphingobium aromaticivorans DSM 12444 3.20.20.120 244 10 85 4.21 4.94
2oztA02 77.57 Ubiquinone and other terpenoid-quinone biosynthesisThermosynechococcus elongatus BP-1O-succinylbenzoate synthase [EC:4.2.1.113]Tlr1174 proteinMetabolic pathways 3.20.20.120 201 14 81 3.32 4.07
1ec7A02 77.44 Ascorbate and aldarate metabolismD-glucarate catabolic processGlucarate dehydratase activityGlucarate dehydrataseGlucarate dehydratase [EC:4.2.1.40] 3.20.20.120 261 12 79 3.66 4.61
2pmqA02 77.16 Roseovarius sp. HTCC2601Mandelate racemase/muconate lactonizing enzyme 3.20.20.120 224 11 83 3.64 4.38
2pozH02 77.04 Putative dehydrataseMesorhizobium loti 3.20.20.120 246 9 85 4.17 4.88
1r6wA01 76.69 Ubiquinone and other terpenoid-quinone biosynthesisMetabolic pathwaysMenaquinone biosynthetic processO-succinylbenzoate synthaseHydro-lyase activity 3.20.20.120 198 13 78 3.66 4.68
2oqhA02 76.55 Putative isomeraseStreptomyces coelicolor 3.20.20.120 240 8 81 3.90 4.78
2oqyA02 76.29 Muconate cycloisomeraseOceanobacillus iheyensis 3.20.20.120 226 10 83 4.01 4.82
2qq6A02 76.19 Rubrobacter xylanophilus DSM 9941Mandelate racemase/muconate lactonizing enzyme-like protein 3.20.20.120 262 9 78 3.31 4.23
2pgeA02 75.92 Ubiquinone and other terpenoid-quinone biosynthesisDesulfotalea psychrophilaRelated to N-acylamino acid racemase (MenC)O-succinylbenzoate synthase [EC:4.2.1.113]Metabolic pathways 3.20.20.120 229 13 81 3.86 4.71
2oktA02 75.49 Ubiquinone and other terpenoid-quinone biosynthesisMetabolic pathwaysO-succinylbenzoic acid (OSB) synthetase, putativeStaphylococcus aureus subsp. aureus COLO-succinylbenzoate synthase [EC:4.2.1.113] 3.20.20.120 189 17 75 3.70 4.92
1tzzA02 74.88 Bradyrhizobium japonicumBll6730 protein 3.20.20.120 256 10 77 3.80 4.89
2o55A00 74.08 3.20.20.190 247 9 77 3.70 4.76
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Displaying entries 1 to 25 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kkoA02
EAIPLFGQSGDDRYIAVDKILKGVDVLPHALINNVEEKLGFKGEKLREYVRWLSDRILSLRSSPRYHPTLHIDVYGTIGL
IFDDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHV
QIKTPDLGGIHNIVDAVLYCNKHGEAYQGGTCNETEISARTCVHVALAARPRLIKPGGFDEGLNIVFNENRTIALLQT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kkoA02
EAIPLFGQSGDDRYIAVDKXILKGVDVLPHALINNVEEKLGFKGEKLREYVRWLSDRILSLRSSPRYHPTLHIDVYGTIG
LIFDXDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRXLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGS
CHXVQIKTPDLGGIHNIVDAVLYCNKHGXEAYQGGTCNETEISARTCVHVALAARPXRXLIKPGXGFDEGLNIVFNEXNR
TIALLQTKD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:57

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:57

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:04

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"