CATH Domain: 1kjqB03 XML data for domain: 1kjqB03

Molscript image for 1kjqB03
1kjqB03
PDB coordinates for domain 1kjqB03

PDB 1kjq, Chain B, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.470 D-amino Acid Aminotransferase; Chain A, domain 1
3.30.470.20 ATP-grasp fold, B domain Gene3D
3.30.470.20.1
3.30.470.20.1.1
3.30.470.20.1.1.1
3.30.470.20.1.1.1.1
3.30.470.20.1.1.1.1.1

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Segment boundaries for domain 1kjqB03

Chopping figure for domain 1kjqB03
DomainStart PDB ResidueStop PDB Residue
1kjqB01 2 122
1kjqB02 123 196
1kjqB03 197 390

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.30.470.20.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3ethA02 84.45 Purine metabolismMetabolic pathways5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]Phosphoribosylaminoimidazole carboxylase ATPase subunitEscherichia coli K-12 3.30.470.20 223 20 82 2.69 3.26
1a9xA06 81.05 3.30.470.20 203 13 81 4.07 4.98
2qf7B03 78.93 Pyruvate carboxylase subunit A [EC:6.4.1.1]Citrate cycle (TCA cycle)Rhizobium etli CFN 42Pyruvate carboxylase subunit B [EC:6.4.1.1]Pyruvate metabolism 3.30.470.20 248 17 74 2.88 3.88
1gsoA03 75.82 Purine metabolismMetabolic pathwaysPhosphoribosylamine--glycine ligase [EC:6.3.4.13]Phosphoribosylamine--glycine ligaseEscherichia coli K-12 3.30.470.20 139 9 61 2.84 4.59
1vkzA03 74.82 Thermotoga maritimaPhosphoribosylamine--glycine ligase [EC:6.3.4.13]Purine metabolismPhosphoribosylamine--glycine ligaseMetabolic pathways 3.30.470.20 129 11 59 2.82 4.72
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kjqB03
VVKFDFEITLLTVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCGDEVI
FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQNVTFDNVQNAVGADLQIRLFGKP
EIDGSRRLGVALATAESVVDAIERAKHAAGQVKV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kjqB03
VVKFDFEITLLTVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCGDEVI
FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQNVTFDNVQNAVGADLQIRLFGKP
EIDGSRRLGVALATAESVVDAIERAKHAAGQVKV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:06

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:06

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:04

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"