CATH Domain: 1kjqA01 XML data for domain: 1kjqA01

Molscript image for 1kjqA01
1kjqA01
PDB coordinates for domain 1kjqA01

PDB 1kjq, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.20 Gene3D
3.40.50.20.1
3.40.50.20.1.1
3.40.50.20.1.1.1
3.40.50.20.1.1.1.1
3.40.50.20.1.1.1.1.1

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Segment boundaries for domain 1kjqA01

Chopping figure for domain 1kjqA01
DomainStart PDB ResidueStop PDB Residue
1kjqA01 2 122
1kjqA02 123 196
1kjqA03 197 391

Structural Neighbourhood (19 entries)

There are 19 matching structural neighberhood comparisons for CATH ID 3.40.50.20.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 19 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1a9xA05 82.76 3.40.50.20 110 14 78 2.80 3.57
1ulzA01 81.90 Pyruvate carboxylase subunit A [EC:6.4.1.1]Citrate cycle (TCA cycle)Pyruvate metabolismPyruvate carboxylase n-terminal domainAquifex aeolicus 3.40.50.20 129 14 84 3.12 3.69
1gsoA01 81.51 Purine metabolismMetabolic pathwaysPhosphoribosylamine--glycine ligase [EC:6.3.4.13]Phosphoribosylamine--glycine ligaseEscherichia coli K-12 3.40.50.20 94 18 74 2.39 3.21
1dv1B01 80.59 Pyruvate metabolismFatty acid biosynthesisPropanoate metabolismMetabolic pathwaysFatty acid biosynthetic process 3.40.50.20 85 17 62 2.17 3.45
2x5oA01 80.12 D-Glutamine and D-glutamate metabolismPeptidoglycan biosynthesisMetabolic pathwaysUDP-N-acetylmuramoylalanine--D-glutamate ligaseUDP-N-acetylmuramoylalanine-D-glutamate ligase activity 3.40.50.720 92 19 71 2.63 3.66
1h2bA02 79.21 Tyrosine metabolismFatty acid metabolism1- and 2-Methylnaphthalene degradationMetabolic pathwaysAeropyrum pernix 3.40.50.720 140 12 70 3.36 4.75
3fpcA02 79.00 Entamoeba histolyticaNADP-dependent alcohol dehydrogenase 3.40.50.720 130 10 73 3.36 4.55
1lssA00 78.95 Trk system potassium uptake protein TrkATrk system potassium uptake protein trkA homologMethanocaldococcus jannaschii 3.40.50.720 132 8 75 3.69 4.87
1ep3B02 78.31 Lactococcus lactis subsp. cremoris MG1363Dihydroorotate dehydrogenase electron transfer subunitProtein bindingDihydroorotate dehydrogenase electron transfer subunit 3.40.50.80 117 3 77 3.25 4.18
3eagA01 78.13 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-]Neisseria meningitidis serogroup BUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3.40.50.720 88 14 68 2.55 3.72
1p3dA01 77.70 D-Glutamine and D-glutamate metabolismUDP-N-acetylmuramate--L-alanine ligaseUDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]Haemophilus influenzaePeptidoglycan biosynthesis 3.40.50.720 87 12 68 2.51 3.66
2pfsA01 77.65 Universal stress protein (Usp)Nitrosomonas europaeaUniversal stress protein A 3.40.50.620 114 9 77 3.56 4.58
1mioB04 77.27 Nitrogenase molybdenum-iron protein beta chainClostridium pasteurianum 3.40.50.1980 98 11 70 3.38 4.81
1vkzA01 77.11 Thermotoga maritimaPhosphoribosylamine--glycine ligase [EC:6.3.4.13]Purine metabolismPhosphoribosylamine--glycine ligaseMetabolic pathways 3.40.50.20 77 19 63 2.75 4.32
1j6uA01 76.95 D-Glutamine and D-glutamate metabolismThermotoga maritimaUDP-N-acetylmuramate--L-alanine ligaseUDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]Peptidoglycan biosynthesis 3.40.50.720 85 12 67 2.78 4.10
2r85A01 76.50 Pyrococcus furiosus5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.-]Purine metabolism5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetaseMetabolic pathways 3.40.50.20 87 11 66 2.56 3.87
1a9xA08 76.42 3.40.50.1380 106 10 78 3.85 4.90
1qfjA02 75.25 Porphyrin and chlorophyll metabolismAquacobalamin reductase / NAD(P)H-flavin reductase [EC:1.16.1.3 1.5.1.29]NAD(P)H-flavin reductaseEscherichia coli K-12 3.40.50.80 135 5 72 3.55 4.89
1iowA01 75.15 D-Alanine metabolismPeptidoglycan biosynthesisD-alanine--D-alanine ligase BD-alanine-D-alanine ligase [EC:6.3.2.4]Escherichia coli K-12 3.40.50.20 84 11 59 2.53 4.25
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Displaying entries 1 to 19 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kjqA01
TLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVP
EIEAIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRLAA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kjqA01
TLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVP
EIEAIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRLAA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:11

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:11

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:04

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"