CATH Domain: 1khxA00 XML data for domain: 1khxA00

Molscript image for 1khxA00
1khxA00
PDB coordinates for domain 1khxA00

PDB 1khx, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.200 Tumour Suppressor Smad4
2.60.200.10 Gene3D
2.60.200.10.1
2.60.200.10.1.1
2.60.200.10.1.1.1
2.60.200.10.1.1.1.1
2.60.200.10.1.1.1.1.1

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Segment boundaries for domain 1khxA00

Chopping figure for domain 1khxA00
DomainStart PDB ResidueStop PDB Residue
1khxA00 265 466

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.60.200.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ygsA00 91.07 Promoter bindingSMAD, mothers against DPP 4Pathways in cancerActivin responsive factor complexBMP signaling pathway 2.60.200.10 190 46 92 1.51 1.63
1u7vB00 90.57 Promoter bindingSMAD, mothers against DPP 4Pathways in cancerBMP signaling pathwayActivin responsive factor complex 2.60.200.10 208 44 95 2.49 2.62
1gxcA00 76.34 DNA damage response, signal transduction resulting in induction of apoptosisSenescenceSerine/threonine-protein kinase Chk2PML bodyProtein binding 2.60.200.20 116 8 54 2.48 4.53
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1khxA00
PVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGE
VFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGA
EYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSM
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1khxA00
PVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGE
VFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGA
EYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSXMX
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:08

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"