CATH Domain: 1khcA01 XML data for domain: 1khcA01

Molscript image for 1khcA01
1khcA01
PDB coordinates for domain 1khcA01

PDB 1khc, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.30 SH3 type barrels.
2.30.30.160 Gene3D
2.30.30.160.7
2.30.30.160.7.1
2.30.30.160.7.1.1
2.30.30.160.7.1.1.1
2.30.30.160.7.1.1.1.1

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Segment boundaries for domain 1khcA01

Chopping figure for domain 1khcA01
DomainStart PDB ResidueStop PDB Residue
1khcA01 223 287
1khcA02 288 356

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.30.30.160.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1sf9A02 84.26 Bacillus subtilisUncharacterized protein yfhH 2.30.30.340 54 5 80 2.71 3.39
1mmdA01 82.52 ActomyosinMyosin II complexActin-myosin filament slidingProtein localizationActin filament binding 2.30.30.360 48 14 69 2.10 3.03
2p84A02 80.16 ORF041Staphylococcus phage 37 2.30.30.290 71 15 69 2.44 3.54
1irxA02 76.49 Aminoacyl-tRNA biosynthesisLysyl-tRNA synthetase, class I [EC:6.1.1.6]Pyrococcus horikoshiiLysyl-tRNA synthetase 2.30.30.300 43 6 66 2.80 4.23
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1khcA01
EYQDDKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMPGMRWVQWFGDGKFSEISADKLVAL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1khcA01
EYQDDKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMPGMRWVQWFGDGKFSEISADKLVAL
BLAST against CATH

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Domain History Events (2)

Insertion by lewis on 18 Jan 2007 19:37

Rechopping chains just before release v3.1.0 in order to fix missing fragments.

Domain assigned by lewis on 18 Jan 2007 19:37

Reassigning this domain to its previous classification as part of fragment fixing process in preparation for release v3.1.0.