CATH Domain: 1kgdA02 XML data for domain: 1kgdA02

Molscript image for 1kgdA02
1kgdA02
PDB coordinates for domain 1kgdA02

PDB 1kgd, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.63 Guanylate Kinase phosphate binding domain
3.30.63.10 Guanylate Kinase phosphate binding domain Gene3D
3.30.63.10.1
3.30.63.10.1.1
3.30.63.10.1.1.1
3.30.63.10.1.1.1.1
3.30.63.10.1.1.1.1.1

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Segment boundaries for domain 1kgdA02

Chopping figure for domain 1kgdA02
DomainStart PDB ResidueStop PDB Residue
1kgdA01 732 763
1kgdA01 827 909
1kgdA02 764 826

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.30.63.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2qorA02 93.72 Purine metabolismGuanylate kinase, putativeGuanylate kinase [EC:2.7.4.8]Plasmodium vivaxMetabolic pathways 3.30.63.10 60 30 95 1.29 1.36
1ex7A01 93.38 CytoplasmIdentical protein bindingPurine metabolismNucleusGuanylate kinase [EC:2.7.4.8] 3.30.63.10 60 35 95 1.05 1.11
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kgdA02
YPIPHTTRPPEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAMYGTKLETIRKIHEQGL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kgdA02
YPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAMYGTKLETIRKIHEQGL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:59

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:59

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:04

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"