CATH Domain: 1kamA00 XML data for domain: 1kamA00

Molscript image for 1kamA00
1kamA00
PDB coordinates for domain 1kamA00

PDB 1kam, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.620 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 Gene3D
3.40.50.620.22
3.40.50.620.22.1
3.40.50.620.22.1.1
3.40.50.620.22.1.1.1
3.40.50.620.22.1.1.1.1

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Segment boundaries for domain 1kamA00

Chopping figure for domain 1kamA00
DomainStart PDB ResidueStop PDB Residue
1kamA00 1 189

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.50.620.22.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ej2A00 81.76 Methanothermobacter thermautotrophicus str. Delta HNicotinamide-nucleotide adenylyltransferase 3.40.50.620 167 16 81 3.87 4.74
1lw7A01 77.93 Haemophilus influenzaeTranscriptional regulator nadRHipB family transcriptional regulator, involved in the regulation of NAD biosynthesis 3.40.50.620 165 13 78 3.92 4.97
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1kamA00
SKKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTV
SLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPT
DYLIPDKVKKYVEENGLYES
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1kamA00
HMPGGSKKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELV
EMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVS
STMIRERFKSKKPTDYLIPDKVKKYVEENGLYES
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:39

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"