CATH Domain: 1ka1A02 XML data for domain: 1ka1A02

Molscript image for 1ka1A02
1ka1A02
PDB coordinates for domain 1ka1A02

PDB 1ka1, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.190 D-Maltodextrin-Binding Protein; domain 2
3.40.190.80 Gene3D
3.40.190.80.2
3.40.190.80.2.1
3.40.190.80.2.1.1
3.40.190.80.2.1.1.1
3.40.190.80.2.1.1.1.1

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Segment boundaries for domain 1ka1A02

Chopping figure for domain 1ka1A02
DomainStart PDB ResidueStop PDB Residue
1ka1A01 2 220
1ka1A02 221 355

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.190.80.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1vdwA02 84.57 Pyrococcus horikoshiiStreptomycin biosynthesisMyo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]Putative uncharacterized protein PH1897Metabolic pathways 3.40.190.80 114 22 83 2.17 2.59
1jp4A02 84.19 Rattus norvegicusInositol or phosphatidylinositol phosphatase activitySulfur metabolism3'(2'),5'-bisphosphate nucleotidase 13'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] 3.40.190.80 129 21 88 2.68 3.02
1lbvA02 82.59 Inositol-1-monophosphataseArchaeoglobus fulgidusStreptomycin biosynthesisMyo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]Metabolic pathways 3.40.190.80 114 19 82 2.40 2.92
1nuwA02 80.57 Sus scrofaInsulin signaling pathwayFructose-1,6-bisphosphatase 1Fructose and mannose metabolismMetabolic pathways 3.40.190.80 135 8 89 3.56 3.97
3b8bA02 80.44 CysQ proteinCysQ, sulfite synthesis pathway proteinBacteroides thetaiotaomicron 3.40.190.80 100 29 74 3.46 4.67
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ka1A02
HVRHLKDTKDMITLEGVEKGHSSHDEQTAIKNKLNISKSLHLDSQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNV
IVHEAGGIHTDAMEDVPLDFGNGRTLATKGVIASSGPRELHDLVVSTSCDVIQSR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ka1A02
HVRHLKDTKDMITLEGVEKGHSSHDEQTAIKNKLNISKSLHLDSQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNV
IVHEAGGIHTDAMEDVPLDFGNGRTLATKGVIASSGPRELHDLVVSTSCDVIQSRNA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:02

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"