CATH Domain: 1k9oI02 XML data for domain: 1k9oI02

Molscript image for 1k9oI02
1k9oI02
PDB coordinates for domain 1k9oI02

PDB 1k9o, Chain I, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.39 Alpha-1-antitrypsin; domain 1
2.30.39.10 Alpha-1-antitrypsin, domain 1 Gene3D
2.30.39.10.17
2.30.39.10.17.1
2.30.39.10.17.1.1
2.30.39.10.17.1.1.1
2.30.39.10.17.1.1.1.1

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Segment boundaries for domain 1k9oI02

Chopping figure for domain 1k9oI02
DomainStart PDB ResidueStop PDB Residue
1k9oI01 11 179
1k9oI01 287 332
1k9oI02 180 286
1k9oI02 333 386

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 2.30.39.10.17.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1imvA01 87.40 Negative regulation of angiogenesisHomo sapiensPigment epithelium-derived factorCell proliferationPositive regulation of neurogenesis 2.30.39.10 169 28 87 2.72 3.11
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1k9oI02
FKGSWKDKFVKERTMDRDFHVSKDKTIKVPTMIGKKDVRYADVPELDAKMIEMSYEGDQASMIIILPNQVDGITALEQKL
KDPKALSRAEERLYNTEVEITLPKFKIIEVNEEGAEAAAANAFGIVPKSLILYPEVHIDRPFYFELKIDGIPMFNGKVIE
P
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1k9oI02
FKGSWKDKFVKERTMDRDFHVSKDKTIKVPTMIGKKDVRYADVPELDAKMIEMSYEGDQASMIIILPNQVDGITALEQKL
KDPKALSRAEERLYNTEVEITLPKFKIIEVNEEGAEAAAANAFGIVPKSLILYPEVHIDRPFYFELKIDGIPMFNGKVIE
P
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:02

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"