CATH Domain: 1k7wA03 XML data for domain: 1k7wA03

Molscript image for 1k7wA03
1k7wA03
PDB coordinates for domain 1k7wA03

PDB 1k7w, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.40 Ribonucleotide Reductase Protein R1; domain 1
1.10.40.30 Fumarase/aspartase (C-terminal domain) Gene3D
1.10.40.30.3
1.10.40.30.3.1
1.10.40.30.3.1.1
1.10.40.30.3.1.1.1
1.10.40.30.3.1.1.1.1

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Segment boundaries for domain 1k7wA03

Chopping figure for domain 1k7wA03
DomainStart PDB ResidueStop PDB Residue
1k7wA01 29 125
1k7wA01 197 236
1k7wA02 126 196
1k7wA02 237 366
1k7wA02 439 465
1k7wA03 367 438

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 1.10.40.30.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1tj7A03 93.75 Arginine and proline metabolismAlanine, aspartate and glutamate metabolismMetabolic pathwaysArgininosuccinate lyase [EC:4.3.2.1]Argininosuccinate lyase 1.10.40.30 71 36 98 1.13 1.15
1q5nA03 85.35 3-carboxy-cis,cis-muconate cycloisomeraseBenzoate degradation via hydroxylation3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]Metabolic pathwaysAcinetobacter sp. ADP1 1.10.40.30 81 12 86 2.54 2.94
1c3cA03 85.04 Thermotoga maritimaAdenylosuccinate lyaseAdenylosuccinate lyase [EC:4.3.2.2]Purine metabolismAlanine, aspartate and glutamate metabolism 1.10.40.30 81 9 87 2.82 3.22
1furA03 79.89 Citrate cycle (TCA cycle)Metabolic pathwaysFumarate hydratase class IIFumarate hydratase, class II [EC:4.2.1.2]Escherichia coli K-12 1.10.40.30 52 17 70 2.30 3.25
1jswB03 78.73 Nitrogen metabolismMetabolic pathwaysAlanine, aspartate and glutamate metabolismMembraneProtein binding 1.10.40.30 50 14 66 2.25 3.38
1j3uA03 78.35 Bacillus sp. YM55-1Aspartase 1.10.40.30 52 13 69 2.12 3.05
1dofA03 78.21 Pyrobaculum aerophilumAdenylosuccinate lyase [EC:4.3.2.2]Purine metabolismAdenylosuccinate lyase (PurB)Alanine, aspartate and glutamate metabolism 1.10.40.30 56 7 55 2.03 3.65
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1k7wA03
TPEMLATDLALYLVRKGVPFRQAHTASGKAVHLAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1k7wA03
TPEMLATDLALYLVRKGVPFRQAHTASGKAVHLAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQ
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:02

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"