CATH Domain: 1k6yA01 XML data for domain: 1k6yA01

Molscript image for 1k6yA01
1k6yA01
PDB coordinates for domain 1k6yA01

PDB 1k6y, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.200 Gene3D
1.10.10.200.2
1.10.10.200.2.1
1.10.10.200.2.1.1
1.10.10.200.2.1.1.1
1.10.10.200.2.1.1.1.1

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Segment boundaries for domain 1k6yA01

Chopping figure for domain 1k6yA01
DomainStart PDB ResidueStop PDB Residue
1k6yA01 1 46
1k6yA02 56 210

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.10.10.200.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ekeB02 83.00 DNA replicationRibonuclease HIIMethanocaldococcus jannaschiiRibonuclease HII [EC:3.1.26.4] 1.10.10.460 47 8 76 3.01 3.93
1io2A02 82.35 DNA replicationRibonuclease HIIThermococcus kodakarensisRibonuclease HII [EC:3.1.26.4] 1.10.10.460 47 4 76 3.10 4.05
1ng6A02 79.25 Hypothetical proteinBacillus subtilisUncharacterized protein yqeY 1.10.10.410 57 4 70 2.90 4.13
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1k6yA01
FLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1k6yA01
FLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:02

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"