CATH Domain: 1k1eD00 XML data for domain: 1k1eD00

Molscript image for 1k1eD00
1k1eD00
PDB coordinates for domain 1k1eD00

PDB 1k1e, Chain D, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1000 Gene3D
3.40.50.1000.15
3.40.50.1000.15.1
3.40.50.1000.15.1.1
3.40.50.1000.15.1.1.1
3.40.50.1000.15.1.1.1.1

Segment boundaries for domain 1k1eD00

Chopping figure for domain 1k1eD00
DomainStart PDB ResidueStop PDB Residue
1k1eD00 5 174

Structural Neighbourhood (30 entries)

There are 30 matching structural neighberhood comparisons for CATH ID 3.40.50.1000.15.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 30 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1nf2A01 85.61 Thermotoga maritimaPutative uncharacterized protein 3.40.50.1000 161 18 84 2.36 2.81
1rlmA01 85.17 Sugar phosphatase supHSugar-phosphatase [EC:3.1.3.23]Escherichia coli K-12 3.40.50.1000 162 17 85 2.98 3.47
3dnpA01 84.59 Stress response protein yhaXBacillus subtilis 3.40.50.1000 144 18 75 2.08 2.74
1wpgA04 84.18 Calcium ion bindingATP catabolic processER-Golgi intermediate compartmentCalcium-transporting ATPase activitySarcoplasmic/endoplasmic reticulum calcium ATPase 1 3.40.50.1000 156 18 72 2.04 2.82
2hszA01 82.29 Phosphoglycolate phosphatase [EC:3.1.3.18]Haemophilus somnus 129PTMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase 3.40.50.1000 148 13 78 2.52 3.20
2nyvA01 82.08 Phosphoglycolate phosphatase [EC:3.1.3.18]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysAquifex aeolicusPhosphoglycolate phosphatase 3.40.50.1000 151 14 81 3.56 4.35
1swvA01 81.47 Bacillus cereusPhosphonoacetaldehyde hydrolase 3.40.50.1000 178 12 76 2.61 3.39
2ah5A01 81.43 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysPhosphoglycolate phosphatase [EC:3.1.3.18]Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 142 14 77 2.61 3.36
2ho4B01 81.32 Mus musculusHaloacid dehalogenase-like hydrolase domain-containing protein 2 3.40.50.1000 159 16 77 2.88 3.71
3d6jA01 81.14 Phosphoglycolate phosphatase [EC:3.1.3.18]Putative haloacid dehalogenase-like hydrolaseBacteroides fragilis NCTC 9343Glyoxylate and dicarboxylate metabolismMetabolic pathways 3.40.50.1000 137 14 74 2.43 3.25
2b0cA01 81.07 Phosphatase yihXGlucose-1-phosphatase activityPutative hydrolase of the HAD superfamilyEscherichia coli K-12 3.40.50.1000 133 14 71 2.49 3.47
3b8cA03 80.77 Oxidative phosphorylationArabidopsis thalianaPlasma membraneATPase 2, plasma membrane-typeProtein binding 3.40.50.1000 163 17 77 2.35 3.05
3e58B01 80.75 Streptococcus thermophilus LMG 18311Beta-phosphoglucomutase, putative 3.40.50.1000 136 17 73 2.45 3.33
1u02A01 80.60 Trehalose-6-phosphate phosphatase related proteinThermoplasma acidophilum 3.40.50.1000 149 16 77 2.57 3.34
2hcfA01 80.46 Chlorobaculum tepidumHydrolase, haloacid dehalogenase-like family 3.40.50.1000 156 15 82 3.34 4.03
2fdrA01 80.38 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.1000 150 16 77 2.78 3.58
3i28A01 80.25 PeroxisomeSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase activityEpoxide hydrolase 2 3.40.50.1000 135 13 70 2.56 3.66
3fvvA01 80.20 Bordetella pertussisPutative uncharacterized protein 3.40.50.1000 148 10 71 2.74 3.82
2hdoA01 79.91 Phosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus plantarumMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase (Putative) 3.40.50.1000 134 10 74 2.44 3.29
2pr7A00 79.87 Corynebacterium glutamicumHaloacid dehalogenase/epoxide hydrolase family 3.40.50.1000 131 11 71 3.20 4.46
1te2A01 79.68 Fructose and mannose metabolismMetabolic pathwaysRiboflavin metabolismThiamine metabolismMetal ion binding 3.40.50.1000 141 13 77 3.07 3.98
1cqzA01 79.63 PeroxisomeMus musculusSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase 2 3.40.50.1000 162 9 75 3.35 4.41
3ed5A01 79.53 Putative HAD-hydrolase yfnBBacillus subtilis2-haloacid dehalogenase [EC:3.8.1.2]1,2-Dichloroethane degradationGamma-Hexachlorocyclohexane degradation 3.40.50.1000 140 13 77 2.63 3.41
2fi1A01 79.21 Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 123 11 66 2.42 3.64
1zjjB01 78.32 4-nitrophenyl phosphatase [EC:3.1.3.41]Pyrococcus horikoshiiGamma-Hexachlorocyclohexane degradationPutative uncharacterized protein PH1952 3.40.50.1000 146 17 75 2.88 3.80
2hx1A01 77.72 Cytophaga hutchinsonii ATCC 33406Possible sugar phosphatase, HAD superfamily 3.40.50.1000 155 10 73 3.28 4.46
2i6xA01 77.58 Hydrolase, haloacid dehalogenase-like familyPutative hydrolase of the HAD superfamilyPorphyromonas gingivalis 3.40.50.1000 127 15 67 2.91 4.34
2p11A01 77.43 Burkholderia xenovorans LB400Putative uncharacterized protein 3.40.50.1000 140 12 72 3.17 4.38
3bwvA01 76.88 Putative 5'(3')-deoxyribonucleotidaseStaphylococcus epidermidis ATCC 12228 3.40.50.1000 121 14 67 2.76 4.12
1rkuA01 76.64 Glycine, serine and threonine metabolismMetabolic pathwaysPhosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]Pseudomonas aeruginosaHomoserine kinase 3.40.50.1000 111 18 62 2.90 4.61
Displaying entries 1 to 30 (page 1 of 1)


Domain ATOM Sequence

>pdb|1k1eD00
LENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEK
ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV
FDTAQGFLKS    

Domain COMBS Sequence

>pdb|1k1eD00
MQQKLENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG
KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQG
KSSVFDTAQGFLKSVKSMGQ    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:41

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"