CATH Domain: 1jznA00 XML data for domain: 1jznA00

Molscript image for 1jznA00
1jznA00
PDB coordinates for domain 1jznA00

PDB 1jzn, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.20
3.10.100.10.20.1
3.10.100.10.20.1.1
3.10.100.10.20.1.1.1
3.10.100.10.20.1.1.1.1

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Segment boundaries for domain 1jznA00

Chopping figure for domain 1jznA00
DomainStart PDB ResidueStop PDB Residue
1jznA00 1 135

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.10.100.10.20.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1h8uB00 89.75 Bone marrow proteoglycanHomo sapiensBone marrow proteoglycanExtracellular regionSugar binding 3.10.100.10 116 25 84 1.77 2.10
1byfA00 86.69 LectinPolyandrocarpa misakiensis 3.10.100.10 123 17 86 2.31 2.67
1sl6A00 85.08 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 168 23 74 2.04 2.74
1eslA00 84.59 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 157 20 73 1.85 2.53
3bdwA00 84.28 Killer cell lectin-like receptor subfamily D, member 1Natural killer cell mediated cytotoxicityNatural killer cells antigen CD94Antigen processing and presentationGraft-versus-host disease 3.10.100.10 123 21 87 3.02 3.46
1rjhA00 83.19 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 22 83 2.48 2.96
3fd4A00 82.06 Glycoprotein 42Human herpesvirus 4 (strain B95-8) 3.10.100.10 140 11 84 2.78 3.30
1cwvA05 76.81 InvasinYersinia pseudotuberculosis 3.10.100.10 100 10 65 2.72 4.13
1f00I03 75.49 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 3.10.100.10 98 13 64 3.12 4.84
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jznA00
NNCPLDWLPMNGLCYKIFNQLKTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHKGQENVWIGLRDKKKDFSWE
WTDRSCTDYLTWDKNQPDHYQNKEFCVELVSLTGYRLWNDQVCESKDAFLCQCKF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jznA00
NNCPLDWLPMNGLCYKIFNQLKTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHKGQENVWIGLRDKKKDFSWE
WTDRSCTDYLTWDKNQPDHYQNKEFCVELVSLTGYRLWNDQVCESKDAFLCQCKF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:13

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"