CATH Domain: 1jz7A04 XML data for domain: 1jz7A04

Molscript image for 1jz7A04
1jz7A04
PDB coordinates for domain 1jz7A04

PDB 1jz7, Chain A, Domain 4

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.320 Gene3D
2.60.40.320.1
2.60.40.320.1.1
2.60.40.320.1.1.1
2.60.40.320.1.1.1.1
2.60.40.320.1.1.1.1.1

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Segment boundaries for domain 1jz7A04

Chopping figure for domain 1jz7A04
DomainStart PDB ResidueStop PDB Residue
1jz7A01 13 218
1jz7A02 219 333
1jz7A03 334 624
1jz7A04 625 730
1jz7A05 731 1022

Structural Neighbourhood (17 entries)

There are 17 matching structural neighberhood comparisons for CATH ID 2.60.40.320.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 17 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3bgaA04 88.16 Galactose metabolismBacteroides thetaiotaomicronBeta-galactosidaseSphingolipid metabolismBeta-galactosidase [EC:3.2.1.23] 2.60.40.320 105 22 95 1.46 1.53
3cmgA02 80.64 Putative beta-galactosidaseBacteroides fragilis NCTC 9343 2.60.40.320 118 9 76 2.99 3.92
3bgaA02 80.58 Galactose metabolismBacteroides thetaiotaomicronBeta-galactosidaseSphingolipid metabolismBeta-galactosidase [EC:3.2.1.23] 2.60.40.320 111 7 79 2.50 3.15
2r2cB00 80.29 Porphyromonas gingivalis28 kDa outer membrane protein Omp28 2.60.40.320 107 5 85 4.10 4.77
1ifrA00 80.17 Perinuclear region of cytoplasmMuscle organ developmentLamin-A/CStructural molecule activityHomo sapiens 2.60.40.1260 113 4 72 2.92 4.02
2pr9A02 78.09 Huntington's diseaseEndocytosisRattus norvegicusClathrin vesicle coatAP-2 complex subunit mu-1 2.60.40.1170 112 5 74 3.47 4.68
1ok8A04 77.40 Dengue virus 2 Puerto Rico/PR159-S1/1969Genome polyprotein 2.60.40.350 100 8 74 3.60 4.83
1p5uA02 77.26 Yersinia pestisChaperone protein caf1MProtein binding 2.60.40.1070 84 8 72 3.00 4.13
2qfpA01 76.88 Fe(3+)-Zn(2+) purple acid phosphatasePhaseolus vulgaris 2.60.40.380 97 4 77 3.56 4.60
1o75A04 76.00 Treponema pallidum47 kDa membrane antigen 2.60.40.1270 82 12 71 3.47 4.84
2g30A01 75.69 AP-2 complex subunit betaHomo sapiensProtein binding 2.60.40.1150 117 5 72 3.58 4.93
1ulvA03 75.31 GlucodextranaseArthrobacter globiformis 2.60.40.1560 86 11 67 3.04 4.48
1ayoA00 75.07 Bos taurusAlpha-2-macroglobulinAlpha-2-macroglobulinComplement and coagulation cascades 2.60.40.690 130 8 70 3.00 4.24
1cwvA02 74.57 InvasinYersinia pseudotuberculosis 2.60.40.920 97 8 74 3.36 4.51
1svbA04 74.48 Genome polyproteinTick-borne encephalitis virus (WESTERN SUBTYPE) 2.60.40.350 96 12 68 3.14 4.56
1cwvA03 74.34 InvasinYersinia pseudotuberculosis 2.60.40.920 102 7 76 3.61 4.72
2nt0A02 71.30 GlucosylceramidaseProtein bindingSphingolipid metabolismGlucosylceramidase [EC:3.2.1.45]Metabolic pathways 2.60.40.1180 109 2 46 2.08 4.45
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Displaying entries 1 to 17 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jz7A04
QFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPN
ATAWSEAGHISAWQQWRLAENLSVTL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jz7A04
QFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPN
ATAWSEAGHISAWQQWRLAENLSVTL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:42

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:42

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:00

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"