CATH Domain: 1jz7A02 XML data for domain: 1jz7A02

Molscript image for 1jz7A02
1jz7A02
PDB coordinates for domain 1jz7A02

PDB 1jz7, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.320 Gene3D
2.60.40.320.2
2.60.40.320.2.1
2.60.40.320.2.1.1
2.60.40.320.2.1.1.1
2.60.40.320.2.1.1.1.1

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Segment boundaries for domain 1jz7A02

Chopping figure for domain 1jz7A02
DomainStart PDB ResidueStop PDB Residue
1jz7A01 13 218
1jz7A02 219 333
1jz7A03 334 624
1jz7A04 625 730
1jz7A05 731 1022

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 2.60.40.320.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3bgaA02 88.87 Galactose metabolismBacteroides thetaiotaomicronBeta-galactosidaseSphingolipid metabolismBeta-galactosidase [EC:3.2.1.23] 2.60.40.320 111 24 93 3.39 3.61
3cmgA02 87.57 Putative beta-galactosidaseBacteroides fragilis NCTC 9343 2.60.40.320 118 20 90 3.58 3.95
3hn3A02 87.42 Beta-glucuronidaseGlycosaminoglycan degradationGlycosaminoglycan catabolic processMetabolic pathwaysStarch and sucrose metabolism 2.60.40.320 103 23 82 3.04 3.69
2r2cB00 80.03 Porphyromonas gingivalis28 kDa outer membrane protein Omp28 2.60.40.320 107 10 83 3.60 4.32
1ze3C01 77.95 Fimbrial chaperone proteinChaperone protein fimCEscherichia coli K-12 2.60.40.360 117 7 83 4.15 4.95
2xg5A01 77.89 Chaperone protein PapDChaperone protein papDEscherichia coli 2.60.40.360 121 4 80 4.00 4.94
2qfpA01 77.06 Fe(3+)-Zn(2+) purple acid phosphatasePhaseolus vulgaris 2.60.40.380 97 7 75 3.32 4.40
1ulvA03 76.71 GlucodextranaseArthrobacter globiformis 2.60.40.1560 86 15 69 2.84 4.10
1cwvA03 76.30 InvasinYersinia pseudotuberculosis 2.60.40.920 102 6 75 3.66 4.85
1svbA04 75.85 Genome polyproteinTick-borne encephalitis virus (WESTERN SUBTYPE) 2.60.40.350 96 9 69 3.16 4.56
1nepA00 75.46 LysosomeBos taurusNiemann-Pick C2 proteinEpididymal secretory protein E1 2.60.40.770 130 7 72 3.55 4.91
1xvsA00 74.53 Vibrio choleraeProtein ApaGApaG protein 2.60.40.1470 120 7 80 3.99 4.99
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jz7A02
TTQISDFHVATRFNDDFSRAVLEAEVQMGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPK
LWSAEIPNLYRAVVELHTADGTLIEAEACDVGFR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jz7A02
TTQISDFHVATRFNDDFSRAVLEAEVQMXGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENP
KLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:41

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:41

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:00

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"