CATH Domain: 1jy5A00 XML data for domain: 1jy5A00

Molscript image for 1jy5A00
1jy5A00
PDB coordinates for domain 1jy5A00

PDB 1jy5, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.730 Ribonuclease Rh; Chain A
3.90.730.10 Ribonuclease Rh; Chain A Gene3D
3.90.730.10.5
3.90.730.10.5.1
3.90.730.10.5.1.1
3.90.730.10.5.1.1.1
3.90.730.10.5.1.1.1.1

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Segment boundaries for domain 1jy5A00

Chopping figure for domain 1jy5A00
DomainStart PDB ResidueStop PDB Residue
1jy5A00 2 208

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.90.730.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1bolA00 85.17 Ribonuclease RhRhizopus niveus 3.90.730.10 222 24 80 2.63 3.28
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jy5A00
HKEFDYFTLALTWSGTECLSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAKYDQNEISILSNDLSKYWPSYSCP
SSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQSALRVT
PVVKCKSDAVEQVQICFDKTLQLQECPSTASTCPSLVSLPIKN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jy5A00
GHKEFDYFTLALTWSGTECLSVKDSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAKYDQNEISILSNDLSKYWP
SYSCPSSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQS
ALRVTPVVKCKSDAVEQVQICFDKTLQLQECPSTASTCPSLVSLPIKNTIKP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:36

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:36

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:59

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"