CATH Domain: 1js1Y01 XML data for domain: 1js1Y01

Molscript image for 1js1Y01
1js1Y01
PDB coordinates for domain 1js1Y01

PDB 1js1, Chain Y, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1370 Gene3D
3.40.50.1370.8
3.40.50.1370.8.1
3.40.50.1370.8.1.1
3.40.50.1370.8.1.1.1
3.40.50.1370.8.1.1.1.1

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Segment boundaries for domain 1js1Y01

Chopping figure for domain 1js1Y01
DomainStart PDB ResidueStop PDB Residue
1js1Y01 1 147
1js1Y01 302 318
1js1Y02 150 301

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.1370.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ef0A01 85.89 Thermus thermophilus HB8Arginine and proline metabolismOrnithine carbamoyltransferaseOrnithine carbamoyltransferase [EC:2.1.3.3]Metabolic pathways 3.40.50.1370 144 23 84 2.03 2.41
3d6nB01 82.68 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Aspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolismMetabolic pathways 3.40.50.1370 147 16 82 3.01 3.63
1edzA02 75.23 One carbon pool by folateIdentical protein bindingMethylenetetrahydrofolate dehydrogenase (NAD+) [EC:1.5.1.15]Purine base biosynthetic processMethylenetetrahydrofolate dehydrogenase (NAD+) activity 3.40.192.10 131 10 67 3.11 4.64
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1js1Y01
MKKFTCVQDIGDLKSALAESFEIKKDRFKYVELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETE
RGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEAATRHREISATVVLKRLL
ENLP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1js1Y01
MKKFTCVQDIGDLKSALAESFEIKKDRFKYVELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETE
RGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEAATRHREISATVVLKRLL
ENLPHHHHHH
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:00

Assigning to "3.40.50.1370" based on similarity with "1js1X01" (NWSI: 100, NWO: 100, SPS: 97.06, SPO: 96, RMSD: 0.39)

Flow stage update by auto on 28 Apr 2006 17:49

NW result present for Domain "1js1Y01"

Flow stage update by auto on 28 Apr 2006 17:43

All required files are present for Domain "1js1Y01"

Flow stage update by auto on 27 Apr 2006 17:30

Beginning processing for Domain "1js1Y01"

Insertion by auto on 08 Mar 2006 18:19

Final ChopClose added based on similarity with "1js1X" [LEE: 0, LME: 0, MR: 6, LG: 6, SS: 97.16, SI: 100, SO: 100]