CATH Domain: 1jovA00 XML data for domain: 1jovA00

Molscript image for 1jovA00
1jovA00
PDB coordinates for domain 1jovA00

PDB 1jov, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.70 Distorted Sandwich
2.70.98 Beta-galactosidase; Chain A, domain 5
2.70.98.10 Gene3D
2.70.98.10.3
2.70.98.10.3.1
2.70.98.10.3.1.1
2.70.98.10.3.1.1.1
2.70.98.10.3.1.1.1.1

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Segment boundaries for domain 1jovA00

Chopping figure for domain 1jovA00
DomainStart PDB ResidueStop PDB Residue
1jovA00 1 269

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.70.98.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lurA00 75.69 Caenorhabditis elegansGlycolysis / GluconeogenesisNematode larval developmentAldose 1-epimerase [EC:5.1.3.3]Growth 2.70.98.10 323 8 75 3.55 4.72
1snzB00 75.26 Aldose 1-epimeraseGlycolysis / GluconeogenesisAldose 1-epimerase [EC:5.1.3.3]Homo sapiens 2.70.98.10 342 11 73 3.64 4.96
1nsxA00 75.04 Aldose 1-epimeraseLactococcus lactis 2.70.98.10 339 12 74 3.62 4.89
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jovA00
MKTTLLKTLTPELHLVQHNDIPVLHLKHAVGTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWF
GGVKQPAHGTARIRLWQLSHYYISVHKVRLEFELFSDLNIIEAKVSMVFTDKCHLTFTHYGEESAQAALHTYFNIGDINQ
VEVQGLPETCFNSLNQQQENVPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVLWNPWHKKTSGMSETG
YQKMLCLETARIHHLLEFGESLSVEISLK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jovA00
MKTTLLKTLTPELHLVQHNDIPVLHLKHAVGTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWF
GGVKQPAHGTARIRLWQLSHYYISVHKVRLEFELFSDLNIIEAKVSMVFTDKCHLTFTHYGEESAQAALHTYFNIGDINQ
VEVQGLPETCFNSLNQQQENVPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVLWNPWHKKTSGMSETG
YQKMLCLETARIHHLLEFGESLSVEISLKG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:09

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"