CATH Domain: 1jofA00 XML data for domain: 1jofA00

Molscript image for 1jofA00
1jofA00
PDB coordinates for domain 1jofA00

PDB 1jof, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.130 7 Propellor
2.130.10 Methylamine Dehydrogenase; Chain H
2.130.10.10 YVTN repeat-like/Quinoprotein amine dehydrogenase Gene3D
2.130.10.10.20
2.130.10.10.20.1
2.130.10.10.20.1.1
2.130.10.10.20.1.1.1
2.130.10.10.20.1.1.1.1

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Segment boundaries for domain 1jofA00

Chopping figure for domain 1jofA00
DomainStart PDB ResidueStop PDB Residue
1jofA00 1 365

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.130.10.10.20.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1l0qA01 80.47 Methanosarcina mazeiORF492 2.130.10.10 295 9 79 2.52 3.16
1p22A02 75.56 Ubiquitin-dependent protein catabolic processF-box/WD repeat-containing protein 1AHomo sapiensProtein bindingSignal transduction 2.130.10.10 295 5 74 2.55 3.42
1pguB02 75.30 Mating projection tipResponse to osmotic stressNucleusActin bindingActin filament depolymerization 2.130.10.10 323 7 81 3.91 4.77
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jofA00
PLHHLIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWTFDHERKNIYGAAKKWSSFAVKSPTEIVHEASHPIGG
HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGVFDPTETYLYSADL
TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAHPTGNYLYALEAGNRICEYVIDPATHPVYTHHSFPLIPPGIPDRD
PETGKGLYRADVCALTFSGKYFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWAITDD
QEGWLEIYRWKDEFLHRVARVRIPEPGFGNAIWYD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jofA00
PLHHLXIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWXTFDHERKNIYGAAXKKWSSFAVKSPTEIVHEASHP
IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGXVFDPTETYLY
SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAXHPTGNYLYALXEAGNRICEYVIDPATHXPVYTHHSFPLIP
PGIPDRDPETGKGLYRADVCALTFSGKYXFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS
DEWXAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGFGXNAIWYD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:49

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:49

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:11

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"