CATH Domain: 1jl5A00 XML data for domain: 1jl5A00

Molscript image for 1jl5A00
1jl5A00
PDB coordinates for domain 1jl5A00

PDB 1jl5, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.80 Alpha-Beta Horseshoe
3.80.10 Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
3.80.10.10 Ribonuclease Inhibitor Gene3D
3.80.10.10.5
3.80.10.10.5.2
3.80.10.10.5.2.1
3.80.10.10.5.2.1.1
3.80.10.10.5.2.1.1.1

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Segment boundaries for domain 1jl5A00

Chopping figure for domain 1jl5A00
DomainStart PDB ResidueStop PDB Residue
1jl5A00 1034 1386

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.80.10.10.5.2.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1xkuA00 80.89 TGF-beta signaling pathwayBos taurusDecorinProtein bindingDecorin 3.80.10.10 305 18 82 3.37 4.10
1h6uA02 74.68 Listeria monocytogenesInternalin H 3.80.10.10 162 22 46 1.74 3.72
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jl5A00
KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSL
KSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQN
LPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLP
ELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVP
ELPQNLKQLHVEYNPLREFPDIPESVEDLRMNS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jl5A00
KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSL
KSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQN
LPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLP
ELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVP
ELPQNLKQLHVEYNPLREFPDIPESVEDLRMNS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:55

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"