CATH Domain: 1jkxA00 XML data for domain: 1jkxA00

Molscript image for 1jkxA00
1jkxA00
PDB coordinates for domain 1jkxA00

PDB 1jkx, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.170 Gene3D
3.40.50.170.1
3.40.50.170.1.1
3.40.50.170.1.1.1
3.40.50.170.1.1.1.1
3.40.50.170.1.1.1.1.1

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Segment boundaries for domain 1jkxA00

Chopping figure for domain 1jkxA00
DomainStart PDB ResidueStop PDB Residue
1jkxA00 1 209

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.170.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1meoA00 91.09 Trifunctional purine biosynthetic protein adenosine-3One carbon pool by folatePurine metabolismPhosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.4.13 2.1.2.2 6.3.3.1]Protein binding 3.40.50.170 202 39 96 3.11 3.23
1fmtA01 86.88 Aminoacyl-tRNA biosynthesisOne carbon pool by folateMethionyl-tRNA formyltransferaseMethionyl-tRNA formyltransferase [EC:2.1.2.9]Charged-tRNA amino acid modification 3.40.50.170 202 18 88 3.15 3.56
2bw0A01 86.00 10-formyltetrahydrofolate catabolic processOne carbon pool by folate10-formyltetrahydrofolate dehydrogenaseFormyltetrahydrofolate dehydrogenase [EC:1.5.1.6]Homo sapiens 3.40.50.170 207 17 90 3.36 3.70
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jkxA00
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP
DVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
SEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jkxA00
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP
DVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
SEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:35

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"