CATH Domain: 1jkeA00 XML data for domain: 1jkeA00

Molscript image for 1jkeA00
1jkeA00
PDB coordinates for domain 1jkeA00

PDB 1jke, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.50 3-Layer(bba) Sandwich
3.50.80 D-tyrosyl-trna(Tyr) Deacylase; Chain: A;
3.50.80.10 Gene3D
3.50.80.10.1
3.50.80.10.1.1
3.50.80.10.1.1.1
3.50.80.10.1.1.1.1
3.50.80.10.1.1.1.1.1

[top]
Segment boundaries for domain 1jkeA00

Chopping figure for domain 1jkeA00
DomainStart PDB ResidueStop PDB Residue
1jkeA00 1 145

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.50.80.10.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2okvB00 92.26 D-tyrosyl-tRNA(Tyr) deacylase 1Homo sapiensD-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] 3.50.80.10 150 40 96 1.05 1.09
1tc5C00 83.80 Leishmania majorProbable D-tyrosyl-tRNA(Tyr) deacylase 3.50.80.10 186 17 76 1.80 2.36
[1]
Displaying entries 1 to 2 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1jkeA00
MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFT
LAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1jkeA00
MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFT
LAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"